prot_H-elongata_contig18845.5156.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18845.5156.1
Unique Nameprot_H-elongata_contig18845.5156.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.810e-19
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:   40 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 187          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.020e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:  247 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 394          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.910e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:  960 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 1107          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.980e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct: 1339 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 1486          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.990e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct: 1359 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 1506          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.010e-18
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct: 1502 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 1649          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 5.100e-18
Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+  A  L+I    Y + MVE FDVK  S+IPAT       K E+ +  E       +P REAVG++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:  551 KNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDARYADTEDRR 698          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5JRE9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.840e-17
Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G   +   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAV R    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:  897 KNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVVRHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGLAVYVDASYADTEDRR 1044          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 6.310e-17
Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    2 KDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            K++G  ++   C I R+ +A  L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P R+A+G++MW++T +  D++ A RAVAR    P   H  A+ KI+ +   T+D GI Y R G  L  +VY +  +    D R
Sbjct: 1069 KNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVRKAIGSMMWVSTFSRPDVSFAARAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GSGLGPSVYVDASYADTEDSR 1216          
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Match: A0A6H5K4T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.100e-16
Identity = 51/134 (38.06%), Postives = 71/134 (52.99%), Query Frame = 0
Query:   24 LKIDHRLYAELMVEAFDVKKGSKIPATSWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRAVARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDFGACLDMR 157
            L+I    Y + MVE FDVK  S+IPAT       K E+    E       +P REA+G++MW++T +  D++ AVRAVAR    P   H  A+ KI+ +   T+D GI Y R G  L + VY +  +    D R
Sbjct:  159 LRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQR-GLGLGLAVYVDASYADTEDRR 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18845.5156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPT0_9PHAE3.810e-1936.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTL3_9PHAE3.020e-1836.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE3.910e-1836.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.980e-1836.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.990e-1836.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE4.010e-1836.54Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE5.100e-1837.18Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRE9_9PHAE1.840e-1735.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE6.310e-1735.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4T5_9PHAE5.100e-1638.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18845contigH-elongata_contig18845:3361..3834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18845.5156.1mRNA_H-elongata_contig18845.5156.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18845 2980..3834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18845.5156.1 ID=prot_H-elongata_contig18845.5156.1|Name=mRNA_H-elongata_contig18845.5156.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
MKDMGNARYNMNCHITRNRKALELKIDHRLYAELMVEAFDVKKGSKIPAT
SWVSTLSKAEESRNPEEKDEMRKFPCREAVGALMWMATMTGLDIASAVRA
VARFCENPGSAHKKAVIKIMQHFLHTKDWGIAYGRQGYVLCMNVYTNLDF
GACLDMR*
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