prot_H-elongata_contig188370.5152.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig188370.5152.1
Unique Name	prot_H-elongata_contig188370.5152.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	177

Homology

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0FAZ0_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAZ0_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 1.300e-110
Identity = 165/175 (94.29%), Postives = 172/175 (98.29%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYL 175
            MNSFFPLIYSI+LFFILFIISFYLIKQIVNTQKVEKKIIDLQD+IKTDKASYE+FYKLGQLYLKKKLFYKAILLFRRALKTWNT+DKI LGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLY+EAYDCYKTTLVWN KN++ASSRIL VKRKVAYL
Sbjct:    1 MNSFFPLIYSITLFFILFIISFYLIKQIVNTQKVEKKIIDLQDSIKTDKASYEIFYKLGQLYLKKKLFYKAILLFRRALKTWNTNDKIALGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYSEAYDCYKTTLVWNPKNELASSRILTVKRKVAYL 175

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F9I7_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9I7_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 1.540e-86
Identity = 130/176 (73.86%), Postives = 152/176 (86.36%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPLIYS  LF  LFIISF+++KQI NTQK+EKKI+ LQ+N+K +  SYE FYKLGQLYLKKKLFYKAILLFR+ALK WN DDKIGLGSLYNTIGFT+F LKQY LA YYY IAI+I+PDYTLALTNLAY YEK+NL  EAY+CYK+TL+W+ +N++ASSRIL V++K  YLV
Sbjct:    1 MNSLFPLIYSTVLFIFLFIISFFILKQISNTQKIEKKIVKLQENVKANNTSYEAFYKLGQLYLKKKLFYKAILLFRQALKIWNPDDKIGLGSLYNTIGFTFFTLKQYSLAKYYYSIAIEILPDYTLALTNLAYTYEKLNLLGEAYNCYKSTLLWDPENKIASSRILVVEKKKGYLV 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A0S0GMY7_COSCS (Uncharacterized protein n=26 Tax=Laminariales TaxID=2886 RepID=A0A0S0GMY7_COSCS)

HSP 1 Score: 259 bits (663), Expect = 3.450e-86
Identity = 130/176 (73.86%), Postives = 152/176 (86.36%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPL+YSI+LF  LF+ISFY++KQI NTQK+EKKI  LQ++IK D  SYE FYKLGQLYLKKKLFYKAILLFR+ALK WN +DKIGLGSLYNTIGFTYF LKQY LA YYY IAI+IIPDYTLALTNL Y+YEK+NL  E+Y+CYK  LVW+ +N++ASSRIL V++K+ YLV
Sbjct:    1 MNSLFPLVYSIALFVFLFVISFYILKQITNTQKLEKKIFKLQESIKKDNVSYETFYKLGQLYLKKKLFYKAILLFRQALKAWNPNDKIGLGSLYNTIGFTYFTLKQYSLANYYYSIAIEIIPDYTLALTNLGYSYEKLNLSVESYNCYKNALVWDPQNKLASSRILVVEKKLRYLV 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F7S5_9PHAE (Uncharacterized protein n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F7S5_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 9.290e-79
Identity = 123/172 (71.51%), Postives = 145/172 (84.30%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKV 172
            MNS FPL+YS +LF  L +ISFY+IKQI NTQKVEKKI  LQ+ +K + ASYE  Y+LGQLYLKKKLFYKAILLFR+ALKTW+T+DKIGLGSLYNTIGFTYF LKQY LA YYY IAI IIPDYTLALTNL Y YEK++L  EAY+CYK TLVW+ KN++A+ RIL  ++++
Sbjct:    1 MNSLFPLVYSAALFIFLSVISFYIIKQISNTQKVEKKIFVLQEAVKKNDASYESLYELGQLYLKKKLFYKAILLFRKALKTWDTNDKIGLGSLYNTIGFTYFTLKQYKLASYYYNIAITIIPDYTLALTNLGYTYEKLDLTVEAYNCYKDTLVWDPKNELAALRILITEKRL 172

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F7S0_AKKLU (Uncharacterized protein n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F7S0_AKKLU)

HSP 1 Score: 241 bits (614), Expect = 9.290e-79
Identity = 120/176 (68.18%), Postives = 144/176 (81.82%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPL+YS +LF  L +ISFY+IKQI NTQKVEKKI  LQ  +KT   SYE FYKLGQLYLKKKL+YKAIL+FR AL  WN++DKIGLGSLYNTIGFTYF LKQY+LA+YYY +AI IIPDYTLALTNL YAYEK+ L  E++DCYK  L W+SKN++A+SR L  ++++  +V
Sbjct:    1 MNSLFPLVYSAALFLFLSVISFYIIKQISNTQKVEKKIFLLQQAVKTSDPSYETFYKLGQLYLKKKLYYKAILVFRNALSVWNSNDKIGLGSLYNTIGFTYFNLKQYELAVYYYNVAITIIPDYTLALTNLGYAYEKLGLTVESHDCYKKALAWDSKNELAASRYLITEKRLLTMV 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A5A4MK99_9PHAE (Uncharacterized protein n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MK99_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.210e-69
Identity = 105/174 (60.34%), Postives = 138/174 (79.31%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAY 174
            MNS FPL+YSI+LF  LF IS+Y++KQI+NTQK+EKKI  LQ+ +K D   YE  Y+LGQLYL+KKLF KA+++FR+ALK W+ +DKIGL +LYN IGFT+F L++YD AIYYYK+AIKIIPD+TL L NL YA+EK+N     Y+CYK  L W+  N++AS+R L V++K+ Y
Sbjct:    1 MNSIFPLLYSIALFIFLFFISYYILKQIINTQKLEKKIFKLQELVKKDDLYYEDCYQLGQLYLRKKLFLKAVVVFRKALKLWDPNDKIGLANLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLVLINLGYAFEKINSIITGYNCYKAALFWDPSNELASTRFLAVEKKLKY 174

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A1I9LVU9_9PHAE (Uncharacterized protein n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVU9_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.720e-69
Identity = 107/176 (60.80%), Postives = 137/176 (77.84%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPL YSI+LF  LF ISFY++KQI+NTQK+EKKI  LQ   K D   +E  Y+LGQLYLKKKLF+KAIL+FR+ALK W  +DKIGLG++YN IGFT+F L+QY  +IYYYKI I+IIPD+TLAL NL YA+EK+N     Y+CYKT L W+  N++AS+R L + +K+ Y++
Sbjct:    1 MNSIFPLFYSIALFLFLFFISFYIVKQIINTQKLEKKIFKLQKLSKKDDLCHEDCYQLGQLYLKKKLFFKAILIFRKALKLWEPNDKIGLGNIYNAIGFTFFNLEQYYYSIYYYKITIQIIPDHTLALINLGYAFEKINSIVPGYNCYKTVLFWDPNNELASTRFLAIAKKLRYIL 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: D1J7A2_ECTSI (Uncharacterized protein ycf37 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A2_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.910e-69
Identity = 104/176 (59.09%), Postives = 142/176 (80.68%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPL YSI+LFF LF ISFY++KQI+NTQK+EKKI  LQ+ +K D   +E  Y+LGQLYL+KKLF KAI++FR+ALK W+ +D IGLG+LYN IGFT+F L++Y+ AIYYYKIA++IIPD+TLAL NL YA+EK+N +   Y+CY+  L W++ N +AS+R L +++K+ Y++
Sbjct:    1 MNSIFPLFYSIALFFFLFFISFYILKQIINTQKLEKKIFYLQELVKKDDLYHEDCYQLGQLYLRKKLFLKAIVVFRKALKLWDPNDIIGLGNLYNAIGFTFFNLEEYEYAIYYYKIAVQIIPDHTLALINLGYAFEKINSFVIGYNCYRAALFWDTTNDLASTRFLSIEKKLRYIL 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A6B7EXQ1_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EXQ1_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.990e-68
Identity = 105/176 (59.66%), Postives = 139/176 (78.98%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTTLVWNSKNQVASSRILGVKRKVAYLV 176
            MNS FPL+YSI LFF L +IS+Y++KQI+NTQK+EKKI  LQ  +K D   YE  Y+LGQLYL+K LF KA+L+FR+ALK W+ +DKIGLG+LYN IGFT+F L++YD AIYYYK+AIKIIPD+TLAL NL Y++EK+N     Y+CYK  L W+  NQ+AS+R   +++K+ Y++
Sbjct:    1 MNSIFPLLYSIGLFFFLSLISYYIVKQIINTQKLEKKIFMLQKLVKKDHPYYEDCYQLGQLYLRKNLFLKAVLVFRKALKLWDPNDKIGLGNLYNAIGFTFFNLEEYDYAIYYYKVAIKIIPDHTLALINLGYSFEKVNSGITGYNCYKAALFWDPYNQLASTRFSVIEKKLKYIL 176

[Close]

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Match: A0A8F0F768_9PHAE (Uncharacterized protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F768_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 8.310e-67
Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 0

Query:    1 MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKASYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFTYFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKTT 151
            MNS FPL+YSI LF IL IIS Y+I+Q+ NTQK EKKI+ LQ NI++++ SY+  YKLGQLYLKKKLF KAILLFR ALKTW+ +DKIGLGSLYNTIGFTYF+LKQYD AIYYY+IAIKI+PDY LAL NLAY YEK++LY EA++ YK T
Sbjct:    1 MNSLFPLLYSIVLFLILLIISSYVIQQVNNTQKAEKKIMVLQKNIQSNRFSYQDNYKLGQLYLKKKLFSKAILLFREALKTWDFNDKIGLGSLYNTIGFTYFKLKQYDFAIYYYQIAIKILPDYALALKNLAYTYEKVSLYNEAFNFYKAT 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot

BLAST of mRNA_H-elongata_contig188370.5152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0FAZ0_9PHAE	1.300e-110	94.29	Uncharacterized protein n=1 Tax=Desmarestia aculea...	[more]
A0A8F0F9I7_9PHAE	1.540e-86	73.86	Uncharacterized protein n=1 Tax=Chorda asiatica Ta...	[more]
A0A0S0GMY7_COSCS	3.450e-86	73.86	Uncharacterized protein n=26 Tax=Laminariales TaxI...	[more]
A0A8F0F7S5_9PHAE	9.290e-79	71.51	Uncharacterized protein n=1 Tax=Pseudochorda nagai...	[more]
A0A8F0F7S0_AKKLU	9.290e-79	68.18	Uncharacterized protein n=1 Tax=Akkesiphycus lubri...	[more]
A0A5A4MK99_9PHAE	1.210e-69	60.34	Uncharacterized protein n=5 Tax=Scytosiphonaceae T...	[more]
A0A1I9LVU9_9PHAE	1.720e-69	60.80	Uncharacterized protein n=1 Tax=Pleurocladia lacus...	[more]
D1J7A2_ECTSI	4.910e-69	59.09	Uncharacterized protein ycf37 n=2 Tax=Ectocarpus s...	[more]
A0A6B7EXQ1_9PHAE	1.990e-68	59.66	Uncharacterized protein n=1 Tax=Cladosiphon okamur...	[more]
A0A8F0F768_9PHAE	8.310e-67	72.85	Uncharacterized protein n=1 Tax=Protohalopteris sp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 52..85 e-value: 0.066 score: 22.3 coord: 125..158 e-value: 0.051 score: 22.7 coord: 91..124 e-value: 2.5E-4 score: 30.4
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 127..149 e-value: 0.091 score: 13.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 125..158 score: 7.346
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 91..124 score: 10.266
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 52..85 score: 8.703
None	No IPR available	PFAM	PF13424	TPR_12	coord: 55..120 e-value: 4.0E-8 score: 33.4
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 5..165
None	No IPR available	PANTHER	PTHR26312:SF125		coord: 5..165
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 26..176
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..25
None	No IPR available	TMHMM	TMhelix		coord: 4..26
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 18..168 e-value: 7.6E-23 score: 83.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 43..162
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 52..158 score: 20.175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig188370	contig	H-elongata_contig188370:297..827 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig188370.5152.1	mRNA_H-elongata_contig188370.5152.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig188370 297..827 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig188370.5152.1 ID=prot_H-elongata_contig188370.5152.1|Name=mRNA_H-elongata_contig188370.5152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MNSFFPLIYSISLFFILFIISFYLIKQIVNTQKVEKKIIDLQDNIKTDKA
SYEVFYKLGQLYLKKKLFYKAILLFRRALKTWNTDDKIGLGSLYNTIGFT
YFELKQYDLAIYYYKIAIKIIPDYTLALTNLAYAYEKMNLYAEAYDCYKT
TLVWNSKNQVASSRILGVKRKVAYLV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom