prot_H-elongata_contig18829.5150.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18829.5150.1
Unique Nameprot_H-elongata_contig18829.5150.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig18829.5150.1 vs. uniprot
Match: D8LGY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGY6_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.240e-22
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0 
Query:    1 VNTDVNPKKQWQQRYNRCVQKFAGGFVQGDPRYARREECLERFDDFQKCVLDAARKMQEQHDQRKAKGWW 70
            ++  V   K+WQ++Y RCV+KF  G+++G+ R   R++CLERFDDFQKCVLDAARKMQEQ   RK  GWW
Sbjct:   14 ISNPVEECKKWQKKYYRCVKKFGRGYMRGEARSEERDDCLERFDDFQKCVLDAARKMQEQRSARK--GWW 81
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18829.5150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGY6_ECTSI1.240e-2258.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18829contigH-elongata_contig18829:5514..6730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18829.5150.1mRNA_H-elongata_contig18829.5150.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18829 5514..6730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18829.5150.1 ID=prot_H-elongata_contig18829.5150.1|Name=mRNA_H-elongata_contig18829.5150.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
VNTDVNPKKQWQQRYNRCVQKFAGGFVQGDPRYARREECLERFDDFQKCV
LDAARKMQEQHDQRKAKGWWR*
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