prot_H-elongata_contig188270.5148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188270.5148.1
Unique Nameprot_H-elongata_contig188270.5148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: B7G2N6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2N6_PHATC)

HSP 1 Score: 122 bits (306), Expect = 7.140e-31
Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKN 78
            E+DPVRG DSFAAFEEVL LAKQ + D VL+ GDLFH+N+PSRRT+Y TM+I+RR+CMG +PVR QI+S+QA NF+N
Sbjct:   46 EKDPVRGMDSFAAFEEVLYLAKQFRCDMVLIAGDLFHDNRPSRRTLYITMEIIRRYCMGPDPVRIQIVSDQAQNFRN 122          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: B7G2N5_PHATC (Double-strand break repair protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2N5_PHATC)

HSP 1 Score: 122 bits (306), Expect = 1.270e-30
Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKN 78
            E+DPVRG DSFAAFEEVL LAKQ + D VL+ GDLFH+N+PSRRT+Y TM+I+RR+CMG +PVR QI+S+QA NF+N
Sbjct:   46 EKDPVRGMDSFAAFEEVLYLAKQFRCDMVLIAGDLFHDNRPSRRTLYITMEIIRRYCMGPDPVRIQIVSDQAQNFRN 122          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A6H5JH84_9PHAE (Mre11_DNA_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JH84_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.280e-30
Identity = 56/62 (90.32%), Postives = 61/62 (98.39%), Query Frame = 0
Query:   18 VLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKNR 79
            +LLLAK+RKVDFVLLGGDLFHENKPSRRT+Y+TMDILRRHCMGDEPV FQIISEQAHNFK+R
Sbjct:    1 MLLLAKERKVDFVLLGGDLFHENKPSRRTLYQTMDILRRHCMGDEPVSFQIISEQAHNFKDR 62          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A7S4MXX5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXX5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.280e-30
Identity = 53/76 (69.74%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFK 77
            ERDP+RG DSFAAFEEVL LAK+ K D +LL GDLFH+NKPSRRT+++TM+I+RR+CMG +PV+FQI+S+QA NF+
Sbjct:   49 ERDPIRGLDSFAAFEEVLALAKRHKCDMLLLAGDLFHDNKPSRRTLHKTMEIIRRYCMGPQPVQFQIVSDQAENFR 124          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A2P4Y1D3_9STRA (DNA repair protein (Mre11) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y1D3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.600e-30
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKN 78
            E+DPVRG DSF +F E+L LA++ +VD +LLGGDLFH+NKPSRRTMY TM +LR HCMGD  V FQ++S+Q+ NF N
Sbjct:   29 EKDPVRGNDSFRSFREILQLAQRERVDLLLLGGDLFHDNKPSRRTMYETMRLLRNHCMGDGAVNFQVVSDQSVNFPN 105          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: UPI001C4E8808 (double-strand break repair protein MRE11-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4E8808)

HSP 1 Score: 113 bits (283), Expect = 6.490e-30
Identity = 49/78 (62.82%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    1 MERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKN 78
            ME+D VR  DSF AFEE+  +A+Q++VDFVLLGGDLFHENKPSR T+ +T++ILRR+C+ D PV+FQ++S+Q  NF N
Sbjct:   26 MEKDEVRRHDSFQAFEEICSIAEQKQVDFVLLGGDLFHENKPSRTTLVKTIEILRRYCLNDRPVQFQVVSDQTMNFAN 103          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A1Y2ED83_9FUNG (Metallo-dependent phosphatase n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ED83_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 7.400e-30
Identity = 47/76 (61.84%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 MERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNF 76
            MERDP+R  DSF  FEE+LL AKQ  VD +LLGGDLFH+NKPSR+T+Y T+ +LR+HCMGD+P + + +S+Q  NF
Sbjct:   27 MERDPLRSNDSFQTFEEILLYAKQYNVDMMLLGGDLFHDNKPSRKTLYNTIALLRKHCMGDKPCQLEFLSDQKRNF 102          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A482RUZ6_9ARCH (Metallophos domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUZ6_9ARCH)

HSP 1 Score: 110 bits (274), Expect = 1.500e-29
Identity = 47/76 (61.84%), Postives = 63/76 (82.89%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFK 77
            E+DPVR QDSFAAFEEVL  AK+ KVDF+LL GD+FHENKPSRRTM+ TM++LR +C  ++P+  ++++EQ+  FK
Sbjct:   22 EKDPVRCQDSFAAFEEVLRTAKENKVDFILLAGDMFHENKPSRRTMHNTMELLRMYCFSEDPIYLEVLNEQSEIFK 97          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A7S2UFV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.960e-29
Identity = 52/77 (67.53%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    2 ERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNFKN 78
            E+DP+RG DSFAA EEVL LA++ K D VLL GDLFH+NKPSRRT+++TM+ILRR+CMG  PV+FQI+S+QA NF++
Sbjct:   92 EKDPIRGSDSFAALEEVLSLARRHKCDMVLLAGDLFHDNKPSRRTLHKTMEILRRYCMGPNPVQFQIVSDQAANFRS 168          
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Match: A0A8C9DS79_PROSS (MRE11 homolog, double strand break repair nuclease n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A8C9DS79_PROSS)

HSP 1 Score: 109 bits (273), Expect = 2.140e-29
Identity = 45/76 (59.21%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 MERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRTMDILRRHCMGDEPVRFQIISEQAHNF 76
            ME+D VRG D+F   +E+L LA++ +VDF+LLGGDLFHENKPSR+T++  +++LR++CMGD PV+F+IIS+Q+ NF
Sbjct:   26 MEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQFEIISDQSVNF 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188270.5148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7G2N6_PHATC7.140e-3170.13Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
B7G2N5_PHATC1.270e-3070.13Double-strand break repair protein n=2 Tax=Phaeoda... [more]
A0A6H5JH84_9PHAE1.280e-3090.32Mre11_DNA_bind domain-containing protein n=2 Tax=E... [more]
A0A7S4MXX5_9STRA1.280e-3069.74Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2P4Y1D3_9STRA1.600e-3064.94DNA repair protein (Mre11) n=1 Tax=Phytophthora pa... [more]
UPI001C4E88086.490e-3062.82double-strand break repair protein MRE11-like n=1 ... [more]
A0A1Y2ED83_9FUNG7.400e-3061.84Metallo-dependent phosphatase n=1 Tax=Neocallimast... [more]
A0A482RUZ6_9ARCH1.500e-2961.84Metallophos domain-containing protein n=1 Tax=arch... [more]
A0A7S2UFV9_9STRA1.960e-2967.53Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A8C9DS79_PROSS2.140e-2959.21MRE11 homolog, double strand break repair nuclease... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029052Metallo-dependent phosphatase-likeGENE3D3.60.21.10coord: 1..79
e-value: 9.0E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11coord: 1..78
NoneNo IPR availableSUPERFAMILY56300Metallo-dependent phosphatasescoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188270contigH-elongata_contig188270:106..850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188270.5148.1mRNA_H-elongata_contig188270.5148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188270 103..850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188270.5148.1 ID=prot_H-elongata_contig188270.5148.1|Name=mRNA_H-elongata_contig188270.5148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MERDPVRGQDSFAAFEEVLLLAKQRKVDFVLLGGDLFHENKPSRRTMYRT
MDILRRHCMGDEPVRFQIISEQAHNFKNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029052Metallo-depent_PP-like