prot_H-elongata_contig1879.5133.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1879.5133.1
Unique Nameprot_H-elongata_contig1879.5133.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig1879.5133.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 2.810e-12
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    1 MRHMTKVYNKVWDSYVQGKPGGILPSGSQSEDALDYVLNGVYAITAGNPIEEEYLDDDTENDAHGEGG 68
            MR + K YN VWDS+V+G+PG  LPSGSQ EDA++Y+LNGVY   +    EE  ++   E    GEGG
Sbjct:  134 MRALKKFYNPVWDSFVEGQPGDQLPSGSQDEDAIEYLLNGVYHTISNTGNEENPIE--LEERRGGEGG 199          
BLAST of mRNA_H-elongata_contig1879.5133.1 vs. uniprot
Match: A0A6H5KAW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW9_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.990e-7
Identity = 34/62 (54.84%), Postives = 40/62 (64.52%), Query Frame = 0
Query:   17 QGKPGGILPSGSQSEDALDYVLNGVYAITAGN---PIEEEYLDDDTENDAHGEGGGGDAGRR 75
            +G+PG  LPSG Q EDALDY+LNGVY  ++GN   PIE E  DDD  +      GGG AG R
Sbjct:   12 KGQPGDNLPSGEQVEDALDYLLNGVYHRSSGNAEDPIELEDGDDDVAD------GGGAAGLR 67          
BLAST of mRNA_H-elongata_contig1879.5133.1 vs. uniprot
Match: A0A6H5JUN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN8_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 5.980e-7
Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MRHMTKVYNKVWDSYVQGKPGGILPSGSQSEDALDYVLNGVYAITAGNPIEEEYLDDDTENDAHGEGGGGDAG 73
            +R + K YN V   +V+G+PG  LPSGSQ +DA++Y+L+GVY + +G    E+ ++ +      GEG   D+G
Sbjct:   27 LREIKKYYNPV---FVEGQPGDQLPSGSQGDDAIEYLLDGVYHMESGTGNAEDPIELEERGGGEGEGWEDDSG 96          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1879.5133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPI6_ECTSI2.810e-1251.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAW9_9PHAE2.990e-754.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN8_9PHAE5.980e-739.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1879contigH-elongata_contig1879:8115..9075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1879.5133.1mRNA_H-elongata_contig1879.5133.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1879 8115..9743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1879.5133.1 ID=prot_H-elongata_contig1879.5133.1|Name=mRNA_H-elongata_contig1879.5133.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
MRHMTKVYNKVWDSYVQGKPGGILPSGSQSEDALDYVLNGVYAITAGNPI
EEEYLDDDTENDAHGEGGGGDAGRR*
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