prot_H-elongata_contig1878.5130.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1878.5130.1
Unique Nameprot_H-elongata_contig1878.5130.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1530
Homology
BLAST of mRNA_H-elongata_contig1878.5130.1 vs. uniprot
Match: D7FLM2_ECTSI (Tetratricopeptide repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM2_ECTSI)

HSP 1 Score: 1137 bits (2941), Expect = 0.000e+0
Identity = 764/1641 (46.56%), Postives = 944/1641 (57.53%), Query Frame = 0
Query:    1 QVVSNDTRDHAEVLLLLARATVEQSGDGGSGDDEARDARKSHGKALETGIKHLRVAVETCPRNQLSLRQELHWHLGRLALSHLQLKLRAGAGSNSQA----------------HTLLLRLARDAGDNLGDAIRLAQAASEVNSVSAIQLAENGTSAISTARQGAATTIDEMRTRIGWTRAELAKLCLTEVAPEHGTVSAIENLNIVRKIHTVESAPVEFITATCLLAEAYRLKGETDKSIETYREAARASALLVNQLHFIDASLNLGAELSASEYDRLASKVRPAKHHRHGKGGGVLTLP-LSPALRGLFGEGIECCLARCRDAAAAASSVRK--GSIPSEASFHTSTSSRGGNAASE--SRSYGTGKQKRKVVWVWIPDLDGTPDCPNKKWTTGMEVTSLIAQTHGVANDRLEGGAKGEIVDVGGCIDVSEYTTEHL-QWKPRQLGGLLSKMRVNTANCTTKHEIAERSVHHPSGLAATATAATASGDFFISPLGEGKSKKKQEKPAGHERVGSESTGYHPNENAKTAAKKNNFASKIDTDQSYQGDNHFGMKLGDYLSAPIGEDSTGTERDQ------------------VSPRVGENVGRVDSSLLESGKSTRR--------GTVSGARGNPTIVRLAPAHIAPPSRPAPQWVLDMQQTAVLVSGAAPSHKVIINRPVPFLG--STAASHAPDSSPSRRSRPRRGSGDDVDDGGGAES--GILRAQPHTLQAFRFLCRSGQLFLAEQLALAGVWDVGASGG--------AGRSRVDDEEISQGGGGSGEVRRPNVGLRTAWMATRLKPMLRLALSERRKRIQQALEDVQRLAGPDEEIFMLPRTCVETRGAATVGWDVRMVPFHHNVVRELRSFEKWLARSGVWAEQPALMLLTTCGTTVPRGLKVDVEAHG--ASDGAGSMGRERVAPSDYPTDEALAEMVDPYEALLCWFYLPPGASSSSDQWHSVMDGGAESR--------------GVGNSTDDDNGATRVACFVAYHDQGKNRENSSDFRGDNGVNESKKRSPKLAELDGKRAAIGARAHNGRRDMVKDVHDDSRPSFEGGSSVNGM----------DDKIDANDFEPGELRVRMILADPGTCQKLREATEVFLSTMRNRNIVKRNALLAFALQDLGFALGVSKILKALPPQIQELTVVHHGLLAVVPVHALPLEEASSIKDPISLGSAKGRRPYSSRTGDDVASGGSSGSDLAAPLTVLDKYSVRYTSSIYALEIAERNAVDAARDIPWYFDTCCVIEDPLREVTSDD----PGLLRHPKNGRAGSGAVRQRDDGLQSQQLKLKHSHHEGRVVAATWSSDPEDCHFCKGESATREVLSTVILESKGMSQALRAARSXXXXXXXXXXAVASGTGQIRGTLHGNMLVTSSAEEAAATSA-----------------ETARLFASKLNQVDAASLLKTLHLRSCALVVLSNGGITDGIHCVEDSESTITAGFPAPK-----DVGDAVRNHLAEKEKTPPLNLADAFIATGARTVVQKIWYDEEMALADTASVTLLCFYEELREATVAGEKRPVAVALRKAQLWIRDATATDVLSRVQGTRGLSDDDSEALVQELTSLFKVMSDTGSGTAIDRPFRGSFYWAGFQA 1529
            +V+ +DTRD AE LLLLARAT+E+S    + +   R   +S  +ALETGI HLR A+ETCP+ QL LRQELHW+LGRLAL+ LQ +LR+ A + + A                 T L+RLAR+AG +L +AI LAQAA EV +  A   A    +A  T     A   D MR R GW RAEL+KLCLT VAP++    AIE+L + R+IH ++ AP E++T+TCLLA+A+ L GE ++SI+ YREAARA+ LL NQLH  D  LN GA +         +  R   +  +  G     +P LS ALRGLFG G   CL RCR+    AS   +  G + SE SF T  ++  G+ AS   + +  + K KR V W W+PD DGTPD P  K +      +  A T    +DR        + +         Y  E L +WKP QL  LL+ + ++ + C  K +I ++ + HP G AA A AA A G+   +    G+       P G E+ GS                    A  + TD   + D   GM L DY+  P  E+S     D                             R+D     S  S            + +  RG   +VRLAPAHIAPPSRPAP+WV+DMQ+  V    +AP  KV+INRP PF G  S AA                                GI+RAQ H LQAFRFLCRSGQLFLAEQLA++GVWD G +G         A    +     ++GGG   E      GLR AWMATRLKP  R AL+ERR+R++QALED +R AG    IF+LPR  VET  AA+  WD+R VP    VV++LRSFEKWL R GVW+ QP L LLTTCGT  PRGLK    A G  AS    S  RE VAPS+YPT+EALAEMVDPYEAL+CWFYLP G SS        + GGA                 G G           VACFVAYHD+GK R  S D    NG  +  K +  + +L+ KRAAI ARA  GRR   +D    S+ S    SS +G           DD++DA DFEPG LRVR++LA PGT Q+LR+ATE FL T+RNRN VKRN L AFALQDL  ALGV KI KALPP IQE+T+V HGLL VVPVHALPLEE S+ +      +A GR P +   G     G    + LAAP+ VLD+Y VRYTSS+YALEIAER A  A R+IPWYF+TCCV+EDPLR V+S+D    P   R    G  G G     D+ ++ Q + L+HS HE RVV ATWSSDP+DCHFCK ESATR+ L T I+ S G+    +  R XXXXXXXXXX           T  G  + T++A+                         TARLFASKLNQVDAAS LK LHLRSC LVVLS GG  D +  VED+E+ I+AG    K     D+ D  ++    + +TPPL LA+AFIA GARTVVQK+WYDEE AL DT  VTLLCFYEEL+EAT+AGEKRPV VALR+AQLW+R AT TD+LSRVQ  RGLS +D+E+L+QEL+SLFKVMS+ G+G A+DRPF   ++WAGFQA
Sbjct:  380 EVIPDDTRDRAEALLLLARATIEKSR-AAAANVPGRRRLQSPSEALETGIGHLRAALETCPQKQLGLRQELHWNLGRLALARLQGRLRSAADAITSASPFGTANGASAAPSGGRTPLIRLAREAGGHLSEAISLAQAAVEVAATVAAAEARTNLAANGTGAGSGAVGDDGMRAREGWARAELSKLCLTGVAPDYYPAVAIEHLRVAREIHPLDQAPAEYVTSTCLLAKAFHLTGEPERSIQAYREAARAAPLLGNQLHHADMDLNPGAIIPGKVNTGPLASPRRQPYQTNDDGRSTTFMPSLSVALRGLFGSGTARCLDRCREEMVVASKAMRDGGGMASEPSFRTVGTAGTGSVASGLGAAARPSSKHKRVVEWTWVPDQDGTPDNPIVKPSAAE---AGRATTTSATDDRDNATVPENVNEA--------YRAEDLARWKPGQLKELLTNLGLDASGCVEKRDIVDKIMRHPGGPAAAAAAAIARGETVAAAPPSGR-------PTG-EKGGSXXXXXXXXXXXXXDVAMGKTAVVVTTDDDEEQDGFVGMTLADYMGRPTEENSNDHYHDNRGGNGXXXXXXXXXXXXXXXXXAARGGNRMDPHAAASSVSGXXXXXXXXDVSSAASGRGG-KVVRLAPAHIAPPSRPAPEWVVDMQRDKV----SAPQRKVVINRPFPFSGVISPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVRAQAHALQAFRFLCRSGQLFLAEQLAISGVWDAGKTGSTDEKDLIAASPRGLASTSANRGGGARSE------GLRAAWMATRLKPAARTALAERRERVRQALEDARRFAGAQGAIFLLPRVGVETAAAASTEWDLRAVPSQGEVVKQLRSFEKWLVRGGVWSAQPLLALLTTCGTAAPRGLKAGTGADGSGASTAKPSSEREFVAPSEYPTEEALAEMVDPYEALVCWFYLPDGGSSD-------VGGGATXXXXXXXXXXXXXXRSGFGQ---------EVACFVAYHDEGKRRP-SDDHGAKNG--QGGKDAKAVTDLEAKRAAIAARAR-GRRQQGEDADGGSQYSDSSISSGDGXXXXXXXXXXSDDELDAEDFEPGALRVRVVLASPGTTQQLRKATEAFLKTLRNRNPVKRNVLSAFALQDLSIALGVPKIFKALPPHIQEVTIVQHGLLGVVPVHALPLEEKSTNEPGRPRSAAMGRPPTAGSAG----GGRXXXAGLAAPMAVLDRYCVRYTSSLYALEIAERAAAAAIREIPWYFNTCCVVEDPLRHVSSEDGSRDPKARRGSSTGADGGGD----DNPMRGQSMGLRHSRHECRVVGATWSSDPDDCHFCKEESATRQTL-TSIVSSGGVMAGGQHGRGXXXXXXXXXX-----------TTVGGAMSTATAKTMXXXXXXXXXXXXXXXXXXXXXXNTARLFASKLNQVDAASFLKQLHLRSCGLVVLSRGGFVDDMQSVEDAETMISAGQEVTKRKEGEDIADGDKDDTPRRMETPPLGLAEAFIAVGARTVVQKMWYDEETALVDT--VTLLCFYEELKEATLAGEKRPVGVALREAQLWLRGATLTDILSRVQDARGLSPEDAESLMQELSSLFKVMSERGNGAALDRPFSSPYHWAGFQA 1947          
BLAST of mRNA_H-elongata_contig1878.5130.1 vs. uniprot
Match: A0A6H5JBP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP1_9PHAE)

HSP 1 Score: 501 bits (1290), Expect = 1.180e-152
Identity = 407/1077 (37.79%), Postives = 507/1077 (47.08%), Query Frame = 0
Query:   95 SQAHTLLLRLARDAGDNLGDAIRLAQAASEVNSVSAIQLAENGTSAISTARQGAATTIDEMRTRIGWTRAELAKLCLTEVAPE-----------------HGT------------------VSAIENLNIVRKIHTVESAPVEFITATCLLAEAYRLKGETDKSIETYREAARASALLVNQLHFIDASLNLGAELSASEYDRLASKVRPAKHHRHGKGGGVLTLPLSPALRGLFGEGIECCLARCRDAAAAASSVRK--GSIPSEASFHTSTSSRGGNAASE--SRSYGTGKQKRKVVWVWIPDLDGTPDCPNKKWTTGMEVTSLIAQTHGVANDRLEGGAKGEIVDVGGCIDVSEYTTEHL-QWKPRQLGGLLSKMRVNTANCTTKHEIAERSVHHPSGLAATATAATASGDFFISPLGEGKSKKKQEKPAGHERVGSESTGYHPNENAKTAAKKNNFASKIDTDQSYQGDNHFGMKLGDYLSAPIGEDSTGTERDQ---------VSPR---------VGENVGRVDS-----SLLESGKSTRRGTVSGA---RGNPTIVRLAPAHIAPPSRPAPQWVLDMQQTAVLVSGAAPSHKVIINRPVPFLGSTAASHAPDSSPSRRSRPRRGSGDDVDDGGGAES--------GILRAQPHTLQAFRFLCRSGQLFLAEQLALAGVWDVGASGGAGRSRV--------DDEEISQGGGGSGEVRRPNVGLRTAWMATRLKPMLRLALSERRKRIQQALEDVQRLAGPDEEIFMLPRTCVETRGAATVGWDVRMVPFHHNVVRELRSFEKWLARSGVWAEQPALMLLTTCGTTVPRGLKVDVEAHG--ASDGAGSMGRERVAPSDYPTDEALAEMVDPYEALLCWFYLPPGASSSSDQWHSVMDGGAESR--------------GVGNSTDDDNGATRVACFVAYHDQGKNRENSSDFRGDNGVNESKKRSPKLAELDGKRAAIGARAHNGRRDMVKDVHDDSR---PSFEGGSSVN-------GMDDKIDANDFEPGELRVRMILADPGTCQKLREATEVFLSTMRNRNIVKRNALLAF 1063
            S   T L+RLAR+AG +L +AI LAQAA EV +  A   A    +A       AA   D MR R GW RAEL+KLCLT VAP+                 H T                   +AIE+L + R+IH ++ APVE++T+TCLLA+A+ L GE ++SI+ Y   AR                                                                   CL RCR+   AAS   +  G + SE S  T   +  G+ AS   + +  + K KR V W W+PD DGTPD P  K  +  E  S    +   A D  +     E V+         Y  E L +WKP QL  LL+ +R++ +    K +I ++ + HP G AA A AA A G+         +S          E  GSE                             + D   GM L DY+  P  E S     D            PR               R+D      S+  S  S  RG VS A   RG   +VRLAPAHIAPPSRPAP+WV+DMQ+  V    +A   KV+INRP PF G T+ +                                     GI+RAQ H LQAFRFLCRSGQLFLAEQLA++GVWD G +G    + +             ++GGG   E      GLRTAWMATRLKP  R AL+ERR+R++QALED +R AG    IF+LPR  VET  AA+  WD+R VP    V+++LRSFEKWL RSGVW+ QP L LLTTCGT  PRGLK    A G  AS    S  RE VAPS+YPT+E LAEMVDPYEAL+CWFYLP G SS        + GGA                 G G           VACFVAYHD+GK R  S D    NG+    K +  + +L+ KRAAI ARA  GRR   +D    S+    S   GS          G DD++DA DFEPG LRVR+ILA PGT  +LR+AT+ FL T+RNRN V    ++ F
Sbjct:   43 SGGRTPLIRLAREAGGHLLEAISLAQAAVEVAATVAAAEARTNRAANGAGAGSAAVGDDGMRAREGWARAELSKLCLTGVAPDYVRCCRSRRAKYGKLQPHSTQFYVYSLPSPSRPYVKYPAAAIEHLRVAREIHPLDQAPVEYVTSTCLLAKAFHLTGEPERSIQAYSGTAR-------------------------------------------------------------------CLDRCREEMVAASKAMRDGGGMASEPSLRTFGKAGTGSVASGLGAAARPSTKHKRVVEWTWVPDQDGTPDNPIVK-PSPAEAGSATTTS---ATDGRDNATVPENVN-------EAYRAESLARWKPAQLKELLTDLRLDASGSVEKRDIVDKIMRHPGGPAAAAAAAIARGETLAGAAPSVRSTG--------EEGGSEXXXXXXXXXXXXXXXXXXXXXXXXXXDGEEQDGFVGMTLADYMGRPTEEKSNDRYHDNGGGNGAGRPSGPRGXXXXXXXXAARGGNRIDPHAAAPSVSGSTGSGGRGDVSSAASGRGG-RVVRLAPAHIAPPSRPAPEWVVDMQRDKV----SALQRKVVINRPFPFSGVTSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVRAQSHALQAFRFLCRSGQLFLAEQLAISGVWDAGTTGPTNENGLITTSPRGLTSTSANRGGGARSE------GLRTAWMATRLKPAARTALAERRERVRQALEDARRFAGARGAIFLLPRVGVETAEAASTEWDLRAVPSQREVIKQLRSFEKWLVRSGVWSAQPLLALLTTCGTAAPRGLKAGTGADGSGASTAKPSSDREFVAPSEYPTEETLAEMVDPYEALVCWFYLPDGGSSD-------VGGGATXXXXXXXXXXXXXXHSGFGQ---------EVACFVAYHDEGKRRP-SDDHGAKNGLGG--KSTKAVTDLEAKRAAIAARAR-GRRQQGEDAEGGSQYSDSSISTGSGXXXXXXXXXGSDDELDAEDFEPGALRVRVILASPGTTLQLRKATDAFLKTLRNRNPVSMFDIVGF 1002          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1878.5130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLM2_ECTSI0.000e+046.56Tetratricopeptide repeat domain protein n=1 Tax=Ec... [more]
A0A6H5JBP1_9PHAE1.180e-15237.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 754..774
IPR024983CHAT domainPFAMPF12770CHATcoord: 1084..1529
e-value: 1.6E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1878contigH-elongata_contig1878:170..11144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1878.5130.1mRNA_H-elongata_contig1878.5130.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1878 170..11144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1878.5130.1 ID=prot_H-elongata_contig1878.5130.1|Name=mRNA_H-elongata_contig1878.5130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1530bp
QVVSNDTRDHAEVLLLLARATVEQSGDGGSGDDEARDARKSHGKALETGI
KHLRVAVETCPRNQLSLRQELHWHLGRLALSHLQLKLRAGAGSNSQAHTL
LLRLARDAGDNLGDAIRLAQAASEVNSVSAIQLAENGTSAISTARQGAAT
TIDEMRTRIGWTRAELAKLCLTEVAPEHGTVSAIENLNIVRKIHTVESAP
VEFITATCLLAEAYRLKGETDKSIETYREAARASALLVNQLHFIDASLNL
GAELSASEYDRLASKVRPAKHHRHGKGGGVLTLPLSPALRGLFGEGIECC
LARCRDAAAAASSVRKGSIPSEASFHTSTSSRGGNAASESRSYGTGKQKR
KVVWVWIPDLDGTPDCPNKKWTTGMEVTSLIAQTHGVANDRLEGGAKGEI
VDVGGCIDVSEYTTEHLQWKPRQLGGLLSKMRVNTANCTTKHEIAERSVH
HPSGLAATATAATASGDFFISPLGEGKSKKKQEKPAGHERVGSESTGYHP
NENAKTAAKKNNFASKIDTDQSYQGDNHFGMKLGDYLSAPIGEDSTGTER
DQVSPRVGENVGRVDSSLLESGKSTRRGTVSGARGNPTIVRLAPAHIAPP
SRPAPQWVLDMQQTAVLVSGAAPSHKVIINRPVPFLGSTAASHAPDSSPS
RRSRPRRGSGDDVDDGGGAESGILRAQPHTLQAFRFLCRSGQLFLAEQLA
LAGVWDVGASGGAGRSRVDDEEISQGGGGSGEVRRPNVGLRTAWMATRLK
PMLRLALSERRKRIQQALEDVQRLAGPDEEIFMLPRTCVETRGAATVGWD
VRMVPFHHNVVRELRSFEKWLARSGVWAEQPALMLLTTCGTTVPRGLKVD
VEAHGASDGAGSMGRERVAPSDYPTDEALAEMVDPYEALLCWFYLPPGAS
SSSDQWHSVMDGGAESRGVGNSTDDDNGATRVACFVAYHDQGKNRENSSD
FRGDNGVNESKKRSPKLAELDGKRAAIGARAHNGRRDMVKDVHDDSRPSF
EGGSSVNGMDDKIDANDFEPGELRVRMILADPGTCQKLREATEVFLSTMR
NRNIVKRNALLAFALQDLGFALGVSKILKALPPQIQELTVVHHGLLAVVP
VHALPLEEASSIKDPISLGSAKGRRPYSSRTGDDVASGGSSGSDLAAPLT
VLDKYSVRYTSSIYALEIAERNAVDAARDIPWYFDTCCVIEDPLREVTSD
DPGLLRHPKNGRAGSGAVRQRDDGLQSQQLKLKHSHHEGRVVAATWSSDP
EDCHFCKGESATREVLSTVILESKGMSQALRAARSRGRGRGRGFGAVASG
TGQIRGTLHGNMLVTSSAEEAAATSAETARLFASKLNQVDAASLLKTLHL
RSCALVVLSNGGITDGIHCVEDSESTITAGFPAPKDVGDAVRNHLAEKEK
TPPLNLADAFIATGARTVVQKIWYDEEMALADTASVTLLCFYEELREATV
AGEKRPVAVALRKAQLWIRDATATDVLSRVQGTRGLSDDDSEALVQELTS
LFKVMSDTGSGTAIDRPFRGSFYWAGFQAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024983CHAT_dom