prot_H-elongata_contig18772.5126.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18772.5126.1
Unique Nameprot_H-elongata_contig18772.5126.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig18772.5126.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 5.970e-5
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 0 
Query:   12 DWGSEGEEEFMNMLNFAMDDEDVEAGQTMPATSSALDFLGWDEEEDQQADEAQDDYDDDLVGYKEDAKTANG---HGSRSRRKQL 93
            DWG++GEEEFM+MLN AM+++D E  +T    +  ++ L  D E D  AD   D+ D   +  KE +++      +GSRSRRKQL
Sbjct:  776 DWGADGEEEFMSMLNLAMEEQDAELSRTKGGAAMDMELLDMDME-DSIADATADENDGVDMSDKEVSRSGGVLGCNGSRSRRKQL 859
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18772.5126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR6_ECTSI5.970e-542.35Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrola... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18772contigH-elongata_contig18772:3352..5161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18772.5126.1mRNA_H-elongata_contig18772.5126.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18772 3352..5161 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18772.5126.1 ID=prot_H-elongata_contig18772.5126.1|Name=mRNA_H-elongata_contig18772.5126.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
RPWNGGLVEYDDWGSEGEEEFMNMLNFAMDDEDVEAGQTMPATSSALDFL
GWDEEEDQQADEAQDDYDDDLVGYKEDAKTANGHGSRSRRKQL
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