prot_H-elongata_contig1876.5121.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1876.5121.1
Unique Nameprot_H-elongata_contig1876.5121.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length365
Homology
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.450e-59
Identity = 175/628 (27.87%), Postives = 241/628 (38.38%), Query Frame = 0
Query:    1 MSHYPLAFLSGVFRGSQLCWTTVDKESFVILSAFQRVPYFLWDGSNIFCDHRNLAYIFSAQ---------------------------------------------------------------------SQDAVARGQIEVVTS-----------LGMVTRSEDGLYRVSYQRRMVLWISEEERMLQARLMVCAHMQDAGHRGA---------------------------------------------------------------------------------------------------------------------------FTSDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERMETTPFQMM--------------------------------------TEQEDLRRDVVKRVREQRDRVRELSGRGHLPVFEVGDYVL-ARVRKPG--------------------RHVRVVEDIVTGETQEVHVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGE-YRAQIAWVDLEDEELTWESMSTIYADTPKYIEKKIR 365
            MSH PL FLSG FRGSQL W TVDKE F I+S F+R+ Y LW G +I  DHRNLAYIF  +                                                                     S++A+   Q  V  S           LG V   ++GL+RV    R VLWI +  R +Q RLM+CAHM++AGHRG                                                                                                                            + SD  THF   VM  +   LGV   F VAN  WS+ T ERM RE+V+T + VL ERR+   +W   + AVQW LN+AYRER  +TP+ +M                                        Q  L + V ++V   R R R  + RG LP F VGDYV+ ARVR+ G                    +HV  V++IV G+ ++VHV R+R YADS L V +++++VF+ +  QGE EM  ++++   P   G  Y  ++ W   E++E TW+ +S IY D P+++++++R
Sbjct: 1004 MSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQVQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELR 1629          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 2.580e-43
Identity = 104/300 (34.67%), Postives = 154/300 (51.33%), Query Frame = 0
Query:  126 FTSDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERMETTPFQMM--------------------------------------TEQEDLRRDVVKRVREQRDRVRELSGRGHLPVFEVGDYVL-ARVRKPG--------------------RHVRVVEDIVTGETQEVHVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGE-YRAQIAWVDLEDEELTWESMSTIYADTPKYIEKKIR 365
            + SD  THF   VM  +   LGV   F VAN  WS+ T ERM REVV+T + VL ERR+   +W   + AVQW LN+AYRER  +TP+ +M                                        Q  L + + ++V   R R R  + RG LP F VGDYV+ ARVR+ G                    +HV  V++IV G+ ++VHV R+R YADS L V +++++VF+ +  QGE EM  ++++   P   G  Y  ++ W   E++E TW+ +S IY D P+++++++R
Sbjct:  109 WVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREVVRTMKAVLQERRRNLRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAPRTSFSTLASSSGEAWNIDTLDATKLKQQVQNVIQTQAVLHKQIQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELR 406          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.010e-39
Identity = 120/452 (26.55%), Postives = 183/452 (40.49%), Query Frame = 0
Query:   75 TSLGMVTRSEDGLYRVSYQRRMVLWISEEERMLQARLMVCAHMQDAGHRGA---------------------------------------------------------------------------------------------------------------------------FTSDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERMETTPFQMM--------------------------------------TEQEDLRRDVVKRVREQRDRVRELSGRGHLPVFEVGDYVLARVRKPGRHVRVVEDIVTGETQEVHVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTPKYIEKKIR 365
            T++G  T   +GL+RV    R VLWI ++   LQ RLMVCAHM++AGHRGA                                                                                                                           + SD  +HF   +M  + + LGV  +F VAN  WS+ T ERM REVV+T + ++ E R    +W   + AVQW LN+A+RER  +TP+ +M                                        Q  L ++V+ +V+  R + R  +  G LP F VGDYV+    +   HV  V++IV+GE ++VHV R+R YAD++L + AE++EVF+    QGEFEM  ++ +       G +  ++ WV  + EE TWE +S ++   P++++ ++R
Sbjct: 1260 TAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLKVQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAER--LHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQFVKSELR 1708          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 7.400e-34
Identity = 115/419 (27.45%), Postives = 144/419 (34.37%), Query Frame = 0
Query:    1 MSHYPLAFLSGVFRGSQLCWTTVDKESFVILSAFQRVPYFLWDGSNIFCDHRNLAYIFSAQ---------------------------------------------------------------------SQDAVARGQIEVVTS-----------LGMVTRSEDGLYRVSYQRRMVLWISEEERMLQARLMVCAHMQDAGHRGA---------------------------------------------------------------------------------------------------------------------------FTSDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERMETTPFQMM 216
            MSH PL FLSG FRGSQL W TVDKE F I+S F+R+ Y LW G +I  DHRNLAYIF  +                                                                     S++A+   Q  V  S           LG V   ++GL+RV    R VLWI +  R +Q RLM+CAHM++AGHRG                                                                                                                            + SD  THF   VM  +   LGV   F VAN  WS+ T ERM RE+V+T + VL ERR+   +W   + AVQW LN+AYRER  +TP+ +M
Sbjct:  228 MSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPAVSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVM 646          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 9.890e-20
Identity = 54/150 (36.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query:  238 RELSGRGHLPVFEVGDYVL-ARVRKPG--------------------RHVRVVEDIVTGETQEVHVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGE-YRAQIAWVDLEDEELTWESMSTIYADTPKYIEKKIR 365
            R  + RG LP F VGDYV+ ARVR+ G                    +HV  V++IV G+ ++VHV R+R YADS L V +++++VF+ +  QGE EM  ++++   P   G  Y  ++ W   E++E TW+ +S IY D P+++++++R
Sbjct:    4 RAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELR 151          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6A3HSR4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3HSR4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-16
Identity = 89/296 (30.07%), Postives = 124/296 (41.89%), Query Frame = 0
Query:  128 SDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERME-TTPFQMMT-------------------------EQEDLR-------------RDVV----KRVREQRDRVRELSGRGHLPVFEVGDYVLARV-------------RKPGRHVRVVEDIVTGETQEV---------HVVRMRPYADSSLVVGAEVREVFEMTKH-QGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTP 357
            SD G HF  QVM+ +S  LG  HHF  A   W++ TVE +NREV+K+ + +LSERR    +W   L  VQ  LN+   +R+   TP    T                         E E ++             R++     KR R  RDR  +  G   LP F  GD+VLA               R P R V+ V D  T E Q++         H  R++ Y D++        E+ E   H QG   + D+ + R  P     +  Q+ W  L+D E +WE   TI +D P
Sbjct:   54 SDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALLGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTNASEKRRRAARDRHAKKRGCVTLPRFSEGDFVLAATATGRSGNKLALLWRGPKRIVKAVNDY-TFEVQDLMAPFDIELRHASRLQLYRDAAR---GHAEELVEQAIHGQGGHLIEDLKACRLSP-ETHRWEVQVKWFGLDDIEQSWEPAETIRSDVP 344          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6G0RX23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RX23_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.280e-14
Identity = 84/295 (28.47%), Postives = 121/295 (41.02%), Query Frame = 0
Query:  128 SDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERME-TTPFQMMT-------------------------EQEDLR-------------RDVV----KRVREQRDRVRELSGRGHLPVFEVGDYVLARV-------------RKPGRHVRVVEDIVTGETQEV---------HVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTP 357
            SD G HF  QVM+ +S  LG  HHF  A   W++ TVE +NREV+K+ + +LSERR    +W   L  VQ  LN+   +R+   TP    T                         E E ++             R++     KR R  RDR  +  G   LP F  GD+VLA               R P R V+ V D  T E Q++         H  R++ Y D++        E+ E   H    ++ + +   +       +  Q+ W  L+D E +WE   TI +D P
Sbjct:  241 SDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALPGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTNASEKRRRAARDRHAKKRG-VTLPRFSEGDFVLAATATGRSGNKLALLWRGPKRIVKAVNDY-TFEVQDLMAPFDIELRHASRLQLYRDAAR---GHAEELVEQAIHGQGGQLIEGLKACRLSPETHRWEVQVKWFGLDDIEQSWEPAETIRSDVP 530          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6A3W606_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3W606_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.860e-14
Identity = 87/301 (28.90%), Postives = 126/301 (41.86%), Query Frame = 0
Query:  128 SDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERME-TTPFQMMT-------------------------EQEDLR-------------RDVV----KRVREQRDRVRELSGRGHLPVFEVGDYVLARV-------------RKPGRHVRVVEDIVTGETQEV---------HVVRMRPYADSSLVVGAEVREVFEMTKH-QGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTPKYIEK 362
            SD G HF  QVM+ +S  LG  HHF  A   W++ TVE +NREV+K+ + +LSERR    +W   L  VQ  LN+   +R+   TP    T                         E E ++             R++     KR R  +DR  +  G   LP F  GD+VLA               R P R V+ V D  T E Q++         H  R++ Y D++        E+ E   H QG   +  + + R  P     +  Q+ W  L+D E +WE   TI +D P + ++
Sbjct:  524 SDQGAHFKNQVMEKLSVALGANHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRLQVQDWPRVLPVVQAALNTMPADRLGGVTPLTAFTALPGGSQLRGILHPRDPLVSTVTWVEDETIQHLASVRAALDGMHREMTSASEKRRRAAQDRHAKKRG-VTLPRFSEGDFVLAATATGRSGNKLALLWRDPKRIVKAVNDY-TFEVQDLMAPFDIELRHASRLQLYRDAAR---GHAEELVEQAIHGQGGHLIEGLKACRLSP-ETHRWEVQVKWFGLDDIEQSWEPAETIRSDVPVHFQQ 818          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A0G4IKA6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKA6_PLABS)

HSP 1 Score: 82.0 bits (201), Expect = 1.840e-13
Identity = 79/303 (26.07%), Postives = 124/303 (40.92%), Query Frame = 0
Query:  128 SDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERMET-TPFQMMT--------------EQEDLRR------------------------DVVK------RVREQRDRVRELSGRGHLPVFEVGDYVL-------------ARVRKPGRHVRVV-------EDIVTGETQEVHVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTPKYIEKKIR 365
            +DGG+HFT ++M+ ++    V HH   A   W++ TVER NR V+   R +L+E +     W      VQ V+N     R+    P  ++T              ++   RR                        D  K       VR+QR R+     + H   F VGDYVL             A+ R P R V+++       ED +T      H  R+R YAD+ L    +++   +   +Q    + D++  R D     E + ++ W   ++ E TWE    IY D P+ ++K IR
Sbjct:  114 TDGGSHFTAEIMEELTRLRDVQHHITTAYCPWANGTVERANRTVLNVMRSILNEAQITTHNWPYLCPVVQHVINHTPSRRLNGYAPITVVTGRSPESPLDQIWDPKERQWRRIPPEGFAKYVPMLQEVLDEIHKAVDEAKAQRHASNVRQQRRRL----NKSHYESFIVGDYVLNAKPVPGPAQKLIAQWRGPYRVVKMINDQVYELEDPLTERHFNAHSQRIRRYADADLNRTVDLKRHLQHADNQ--LLVDDLLDCRVD-RETQELQIKVLWSGFDEAEATWEPARVIYEDVPELVQKLIR 409          
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Match: A0A6G0MW14_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MW14_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.140e-13
Identity = 77/301 (25.58%), Postives = 120/301 (39.87%), Query Frame = 0
Query:  126 FTSDGGTHFTGQVMQMVSSRLGVVHHFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVLNSAYRERM--------------------------ETTPFQMMTEQE-----------------DLRRDVVKRVREQRDRVRELSGRGHLPVFEVGDYVLARV-------------RKPGRHVRVVEDIVTGETQEV---------HVVRMRPYADSSLVVGAEVREVFEMTKHQGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMSTIYADTPKYIE 361
            + SD G HF  Q+++ +   LG  HHF  A   W++ TVE +NREV+K F+ +LSE+R    +W+  L  +Q  LNS   +R+                           T P    TE +                 +L     KR R  R+R  +  G   LP F  GD+VLA               R P R ++ + D  T E Q++         H  R++ Y D   V      E+ E   H     + + +   +       +  Q+ W  L++ E +WE + TI  D P +++
Sbjct:   52 WVSDQGAHFKNQLIEQLRVALGAHHHFTTAYTPWANGTVEVVNREVLKGFKALLSEKRLHVKDWTSVLPIIQAALNSMPADRLGGVSPLTAFTALPGGSQLRGILHPSDPTVPTVSWTEDQIQQHLASVRTALDGMHLELTNASEKRRRAARERHAKKKG-VVLPKFSEGDFVLAATATGRSGNKLALVWRGPKRIIKALNDY-TFEVQDLVEPFALEIRHASRLQLYRD---VDRGRAEELVEQAIHGQGGHLVEALRACRVSPDTQRWEVQVKWYGLDELEESWEPVETIREDVPVHLQ 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1876.5121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE2.450e-5927.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS6_9PHAE2.580e-4334.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE2.010e-3926.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE7.400e-3427.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAI3_9PHAE9.890e-2036.00Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6A3HSR4_9STRA1.320e-1630.07Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6G0RX23_9STRA2.280e-1428.47Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6A3W606_9STRA2.860e-1428.90Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A0G4IKA6_PLABS1.840e-1326.07Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A6G0MW14_9STRA3.140e-1325.58Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 103..241
e-value: 4.0E-18
score: 67.3
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 3..67
e-value: 6.5E-8
score: 32.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 125..220
score: 9.708
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 312..365
score: 8.883
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 104..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1876contigH-elongata_contig1876:11052..12932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1876.5121.1mRNA_H-elongata_contig1876.5121.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1876 11052..12932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1876.5121.1 ID=prot_H-elongata_contig1876.5121.1|Name=mRNA_H-elongata_contig1876.5121.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=365bp
MSHYPLAFLSGVFRGSQLCWTTVDKESFVILSAFQRVPYFLWDGSNIFCD
HRNLAYIFSAQSQDAVARGQIEVVTSLGMVTRSEDGLYRVSYQRRMVLWI
SEEERMLQARLMVCAHMQDAGHRGAFTSDGGTHFTGQVMQMVSSRLGVVH
HFGVANVSWSHRTVERMNREVVKTFRVVLSERRQPPSEWSLALGAVQWVL
NSAYRERMETTPFQMMTEQEDLRRDVVKRVREQRDRVRELSGRGHLPVFE
VGDYVLARVRKPGRHVRVVEDIVTGETQEVHVVRMRPYADSSLVVGAEVR
EVFEMTKHQGEFEMTDVISVRKDPTRVGEYRAQIAWVDLEDEELTWESMS
TIYADTPKYIEKKIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR041373RT_RNaseH
IPR001584Integrase_cat-core
IPR000953Chromo/chromo_shadow_dom
IPR012337RNaseH-like_sf