prot_H-elongata_contig18730.5106.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18730.5106.1
Unique Nameprot_H-elongata_contig18730.5106.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length508
Homology
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Match: A0A6H5K8F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F0_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.060e-127
Identity = 209/312 (66.99%), Postives = 250/312 (80.13%), Query Frame = 0
Query:  202 RVSAPTLLDFDADEQPSASPYPKKGASEKGSG-------NPMLGDFLCRFFARMITKRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMAIRGLDLKVLTLLWRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMMNATLRKLETYATNPLSLRKSLINISQVTAKRSRLVIDGDMVYDNARVPFNYRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPLVPLQTFDVDIGDHARVESIRIVNGQVAVRTRFVLSPFPPLVVASTLKRAALRYDVGEKLSVIFDNLIQNMKI 506
            +VS P+LL+ +ADE     P  K+  + + +G       +P+    L     R IT RA LVEGLEV VDAR+NREAMSGLLQ VGITFNHLELENL+ISGGA M I  LDLKV+TLLW+RF SFKKPFE+ GSYV TSEDL+TS +VRRLV +MMN+TLRKLET AT P  LRKS I I+QV+AKRSRLVI+G+M YD+A+VPF YRTSIGV+ +GHVVYLK +EVFWEN+GGSLSLPL+PL+TFDVD+G+ AR+ESIRIVNGQVA++ R V+SPFPPL+VAS  KRAA R+DV E+LSV F NL+QNMKI
Sbjct:  456 KVSPPSLLNLEADEPMEVLPPLKERMAMEETGVERAVTKDPLWSKILVWVLERAITNRAMLVEGLEVSVDARSNREAMSGLLQSVGITFNHLELENLQISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSIVRRLVTNMMNSTLRKLETLATEP--LRKSSITITQVSAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENIGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASVRKRAAFRFDVAERLSVTFGNLVQNMKI 765          
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Match: D7G8F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F0_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 1.730e-109
Identity = 223/460 (48.48%), Postives = 275/460 (59.78%), Query Frame = 0
Query:   69 SSPLRIQQALLSLLRRVFPFGRLGVRRSRRPRAMQRKPEEERAIGKRIDKLHPPVSWNW-PITCDE-----NSTTGPDSEDYTRVLEKKNQNPRYKTIESDRGSDRTITMAASTKTQESRVKQIPLSYPRPRSTAYPRP--------RVSAPTLLDFDADEQPSA-SPYPKKGASEKG------SGNPMLGDFLCRFFARMITKRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMAIRGLDLKVLTLLWRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMMNATLRKLETYATNPLSLRKSLINISQVTAKRSRLVIDGDMVYDNARVPFNYRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPLVPLQTFDVDIGDHARVESIRIVNGQVAVRTRFVLSPFPPLVVASTLKRAALRYDVGEKLSVIFDNLIQNMKIF 507
            S+P+   QALLSL+R V   GR G++R  +  A      E    G+R D L     W W P    E     N  +G  +  Y R        P+   +   R   + +T            +Q+   YPRP+ST             +VS P+LL+ +ADE      P  ++ A EK       + +P+    L   F R IT RA LVEGLE                                ISGGA M I  LDLKV+TLLW+RF SFKKPFE+ GSYV TSEDL+TS MVRRLV +MMN+TLRKLET AT P  LRKS I I+QV AKRSRLVI+G+M YD+A+VPF YRTSIGV+ +GHVVYLK +EVFWENVGGSLSLPL+PL+TFDVD+G+ AR+ESIRIVNGQVA++ R V+SPFPPL+VAS  KRAA R+DV E+LSV F NL+QN+KIF
Sbjct:  105 STPVAAFQALLSLVRWVLTAGRSGMKRQEQAVATGAAAMER---GQRRDGLQL-FQWMWRPFAVLEGGSVANRNSGGRASKYRR--------PQATGVPKQRAMLQPLT-----------TQQLQSRYPRPQSTXXXXXXXXXXXXXKVSPPSLLNLEADEPMEILPPLKERMAMEKADVERAVTKDPLWSKILVWVFERAITNRAMLVEGLE--------------------------------ISGGARMNITNLDLKVMTLLWKRFGSFKKPFEIEGSYVLTSEDLSTSSMVRRLVTNMMNSTLRKLETLATEP--LRKSSITITQVLAKRSRLVIEGEMAYDSAKVPFTYRTSIGVKGKGHVVYLKDAEVFWENVGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASLRKRAAFRFDVAERLSVTFGNLVQNIKIF 507          
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Match: A0A835YIN5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN5_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.420e-43
Identity = 116/336 (34.52%), Postives = 178/336 (52.98%), Query Frame = 0
Query:  192 RPRSTAYP--------RPRVSAPTLLD---------FDADEQPSASPYPKKGASEKGSGNPMLGDFLCRFFARMITKRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMAIRGLDLKVLTLLWRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMMNATLRKLETYATNPLSLRKSLINISQVTAKRSRLVIDGDMVYDNARVPFNYRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPL-------VPLQTFDVDIGDHARVESIRIVNGQVAVRTRFVLSPFPPLVVASTLKRAALRYDVGEKLSVIFDNLIQN 503
            RP++T  P        RPRV AP L+          + AD    A P   +  S+     P+ G  L    A++I KRA  VEGL++ V A +NR+A+SG L+ V   F  L L  ++I+GGA M + G+DLK+L L+ RR  +FKKPF+V G +VFTS D   S  +R +V++++ A+         N LSL    + +++V+ K  R+VID      +    F+   ++    +GHVV L+     + N  G             +P      D+GD+ R+E++ I NG+  +R  FV++P PPL+VA   KR  +RYDVGE++S I  +++ N
Sbjct:   45 RPKATRIPAAPYVSRARPRV-APRLVPAPMRSTAGLYKADLIEEAGPKLDERPSDDAP-IPVTGKALSWMLAQIIYKRALRVEGLDLLVQAASNRKALSGNLKTVWCKFRTLALPAIQITGGANMVVTGVDLKMLLLMHRRLGAFKKPFQVRGEWVFTSNDFVASNAIRNMVQAILTASF--------NALSL--GAVRVTRVSIKGDRIVIDAR---SSVLQRFSCSANLATSSDGHVVSLRSLR--YSNQAGEFLFQTPWQLAATLPRDLVSCDMGDNTRIEALTIRNGRATLRGCFVVTPTPPLIVADVGKRGMVRYDVGERISAIVSDVLDN 363          
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Match: D8LB91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB91_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.200e-39
Identity = 99/307 (32.25%), Postives = 147/307 (47.88%), Query Frame = 0
Query:  244 FFARMITKRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMAIRGLDLKVLTLL---WRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMMNATLRKLETYATNPLSLR-------------------------------------------KSLINISQVTAKRSRLVIDGDMVYDNA--RVPFNYRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPLVPLQTFDVDIGDHARVESIRIVNGQVAVRTRFVLSPFPPLVVAST-LKRAALRYDVGEKLSVIFDNLI 501
            F  R I   A+    L V V+ARNNR+AM G  + + I F     E++++SGGA   + G+D+  L LL   WRR R  ++P E  G   FT  D+A SP +RRL + ++N  LR     A                                                  +  +++  V    ++L I+G+M       RVPF Y  S+    +GHV+Y KGS V+W   GG + LP++PLQ+F +D+GD AR+E +RI  G +++  RF+L+  P   VA   LKR  + YD+ E LS +  N +
Sbjct:   28 FIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGAFELL-GVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALRPRAKRAAVAXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXSEQQQGGLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASADGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSLGGRFILTNTPGFTVALPGLKRGDINYDLAESLSRLVSNCL 333          
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Match: A0A6H5K9J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J0_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.650e-39
Identity = 99/302 (32.78%), Postives = 148/302 (49.01%), Query Frame = 0
Query:  244 FFARMITKRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMAIRGLDLKVLTLL---WRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMMNATLRKLETYA--------------------------------------TNPLSLRKSLINISQVTAKRSRLVIDGDMVYDNA--RVPFNYRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPLVPLQTFDVDIGDHARVESIRIVNGQVAVRTRFVLSPFPPLVVAST-LKRAALRYDVGEKLSVIFDNLI 501
            F  R I   A+    L V V+ARNNR+AM G  + + I F     E++++SGGA   + G+D+  L LL   WRR R  ++P E  G   FT  D+A SP +RRL + ++N  L+     A                                             +  +++  V    ++L I+G+M       RVPF Y  S+   ++GHV+Y KGS V+W   GG + LP++PLQ+F +D+GD AR+E +RI  G ++V  RF+L+  P   VA   LKR  + YD+ E LS +  N +
Sbjct:  124 FIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGAFELL-GVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALQPRAKRAGVVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQQQGRLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASQDGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSVGGRFILTNTPGFTVALPGLKRGDINYDLAEGLSRLVSNCL 424          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18730.5106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K8F0_9PHAE1.060e-12766.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F0_ECTSI1.730e-10948.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIN5_9STRA1.420e-4334.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LB91_ECTSI1.200e-3932.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9J0_9PHAE1.650e-3932.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18730contigH-elongata_contig18730:2828..7141 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18730.5106.1mRNA_H-elongata_contig18730.5106.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18730 2620..7158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18730.5106.1 ID=prot_H-elongata_contig18730.5106.1|Name=mRNA_H-elongata_contig18730.5106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=508bp
MTTAEVVATVLAVATAARFSFPLLDRWSVGPRLPSALQGAGSGTEGSAGG
DGSVSWGGGRSASSGRGSSSPLRIQQALLSLLRRVFPFGRLGVRRSRRPR
AMQRKPEEERAIGKRIDKLHPPVSWNWPITCDENSTTGPDSEDYTRVLEK
KNQNPRYKTIESDRGSDRTITMAASTKTQESRVKQIPLSYPRPRSTAYPR
PRVSAPTLLDFDADEQPSASPYPKKGASEKGSGNPMLGDFLCRFFARMIT
KRARLVEGLEVHVDARNNREAMSGLLQEVGITFNHLELENLRISGGAIMA
IRGLDLKVLTLLWRRFRSFKKPFEVSGSYVFTSEDLATSPMVRRLVESMM
NATLRKLETYATNPLSLRKSLINISQVTAKRSRLVIDGDMVYDNARVPFN
YRTSIGVRREGHVVYLKGSEVFWENVGGSLSLPLVPLQTFDVDIGDHARV
ESIRIVNGQVAVRTRFVLSPFPPLVVASTLKRAALRYDVGEKLSVIFDNL
IQNMKIF*
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