prot_H-elongata_contig186972.5094.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186972.5094.1
Unique Nameprot_H-elongata_contig186972.5094.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 5.060e-72
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            MFFLKEYYP LIFLGFSL LA LIFGASY LA S++D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA SLSQLPSIGYWSMMDFL ELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPALIFLGFSLFLAALIFGASYILAISDSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 2.930e-71
Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            MFFLKEYYPVLIFLGFSLALA +IFGAS+ LA S+AD EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPW+ SLSQLPSIGYWSM+DFL ELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPVLIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI)

HSP 1 Score: 212 bits (539), Expect = 4.000e-69
Identity = 105/120 (87.50%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            MF LKEYYP LIFL FS  LA +IFGASY LA S AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA SLSQLPSIGYWSMMDFL ELV+GFIYAWQIGSLDWE
Sbjct:    1 MFLLKEYYPALIFLVFSFVLAAIIFGASYILAVSSADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS)

HSP 1 Score: 209 bits (531), Expect = 6.640e-68
Identity = 102/120 (85.00%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            MFFL+EY P LI+L FSL LA +IFGASYTLA +E+DNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWAASLSQLP +GYWS++DFL ELV+GFIYAWQIGSLDWE
Sbjct:    1 MFFLREYSPALIYLCFSLILASVIFGASYTLALAESDNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH)

HSP 1 Score: 203 bits (516), Expect = 1.250e-65
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDW 119
            MF+L EYYPVL+F   S+ LA LIFG SY LAFS+AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQLPS+GYWSMMDFL EL++GFIYAW+IGSL+W
Sbjct:    1 MFYLHEYYPVLLFFLISILLAFLIFGLSYILAFSKADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.290e-65
Identity = 95/117 (81.20%), Postives = 109/117 (93.16%), Query Frame = 0
Query:    4 LKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            L EYYP+L+F+ FSL L+LLIFGASYT + +E DNEK+SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPW  +LS+LP++GYWSM+DF++ELVIGFIYAWQIGSLDWE
Sbjct:    4 LPEYYPILLFITFSLFLSLLIFGASYTFSIAEPDNEKVSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 1.770e-65
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDW 119
            MF   EYYPVL+FL     LA++IFGASY L FS+ADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPWA +LSQLPS+GYWSMMDFLLELV+GFIYAWQIGSL+W
Sbjct:    1 MFCFHEYYPVLLFLVVGFILAVIIFGASYFLVFSKADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 4.300e-64
Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 0
Query:    1 MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            MF+L EYY +LIFL  S+ LA +IFGASY LA S +D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVF+FPWA SLSQ+PSIGYWSMMDFL ELV+GFIYAW+IGSL+W 
Sbjct:    1 MFYLHEYYSILIFLVISVLLAFIIFGASYLLALSNSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEWS 120          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA)

HSP 1 Score: 179 bits (453), Expect = 5.680e-56
Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 0
Query:    5 KEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLP-SIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            +EYYP+L+F   S+ LA LIFGASY LA ++ D EKLSSYECGFDPYEDARNAFDVRFYLVAILFL+FD+E VFLFPWA  L Q   S+G WSM+DFL EL++GF+YAWQIGSLDWE
Sbjct:    7 QEYYPILVFTFLSIGLAGLIFGASYALALAKPDTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDWE 123          
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Match: D2Z252_HETAK (NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z252_HETAK)

HSP 1 Score: 173 bits (438), Expect = 1.060e-53
Identity = 79/118 (66.95%), Postives = 102/118 (86.44%), Query Frame = 0
Query:    3 FLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDFLLELVIGFIYAWQIGSLDWE 120
            F++EY PVLIFLG S+ L+ +IFG SY LA  + D EKLS YECGFDPYEDAR AFDVRFYLVAILF++FD+E ++LFPWA SL+Q+ S+G+W+M+DFL+EL IGF+YAW++G+L+WE
Sbjct:    5 FIQEYSPVLIFLGISIVLSGVIFGLSYVLAIHKPDTEKLSPYECGFDPYEDARQAFDVRFYLVAILFIIFDLEAMYLFPWAISLNQIGSMGFWTMLDFLVELGIGFVYAWRVGALEWE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186972.5094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U1XDC4_9PHAE5.060e-7290.00NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Ph... [more]
E6ZET4_ECTSI2.930e-7189.17NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ect... [more]
Q94YZ1_PYLLI4.000e-6987.50NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ect... [more]
A0A0U1WNN7_SARFS6.640e-6885.00NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sa... [more]
Q2TU99_DICDH1.250e-6582.35NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
A0A8E8U4L6_9PHAE1.290e-6581.20NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pha... [more]
A0A8F0K0X7_9PHAE1.770e-6583.19NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pro... [more]
A0A4Y5T7V9_9PHAE4.300e-6480.83NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
A0A7S6UA31_9STRA5.680e-5673.50NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sch... [more]
D2Z252_HETAK1.060e-5366.95NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Het... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 23..119
e-value: 1.2E-33
score: 115.2
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 4..120
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3D1.20.58.1610coord: 2..120
e-value: 4.2E-38
score: 132.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidHAMAPMF_01394NDH1_NuoAcoord: 3..120
score: 17.543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186972contigH-elongata_contig186972:815..1177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186972.5094.1mRNA_H-elongata_contig186972.5094.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186972 531..1177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186972.5094.1 ID=prot_H-elongata_contig186972.5094.1|Name=mRNA_H-elongata_contig186972.5094.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
MFFLKEYYPVLIFLGFSLALALLIFGASYTLAFSEADNEKLSSYECGFDP
YEDARNAFDVRFYLVAILFLLFDIETVFLFPWAASLSQLPSIGYWSMMDF
LLELVIGFIYAWQIGSLDWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3
IPR038430NDAH_ubi_oxred_su3_sf
IPR023043NAD(P)H_OxRDtase_bac/plastid