prot_H-elongata_contig18692.5089.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18692.5089.1
Unique Nameprot_H-elongata_contig18692.5089.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig18692.5089.1 vs. uniprot
Match: D7FW85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW85_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.830e-91
Identity = 159/284 (55.99%), Postives = 197/284 (69.37%), Query Frame = 0
Query:    1 ERERDRVAWLAWDEGFRAGEKFCVGDSGAADESVAWLNHLIGGVWGGHLTGPHARQTSVSGTRSSSANRFVF----------EGLRSFVSEQLAANIAEALEEFNSKSTNVVRVELQEVDLGSSSPQILGVKVLDPVASAAPGWGDGRCGTLGGDCVALRIDLEVATRGLRVGVVVKPSTRGDKALLPTGTVRLLELYLRGSLSVRVELRKEFPFVGMALVAFDGEPDVQVRMEQWGLDALTLG----AVDEWARVGLQGALKPFLLPGYLEVDAAHALCPDCP 270
            ERERDR AWLAWDEG+R G+     D  A  E+ AWLNH++   WGG         T  +G    +  R V           +GL SFV+E L     E LEE   K T+VV VEL +V+LGSS+PQILG+ +LDP +SA+PGWGDGRC   G +C++ R+DLEVA   LRVGV VK S+  +KALLPTGTVRLLEL+ RGS+SVR ELR EFPFV  AL+AFD  PDVQ+++EQWGLDAL+LG    AVDEWAR+ LQ A+ P+++PG++EVDAA A+CPDCP
Sbjct:  392 ERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWGGTK---RVVPTGFAGVNGIAGGRDVHGCVVTGMLAADGLSSFVAEHLTEGFLEVLEEM--KPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRCNHEG-ECLSFRVDLEVAAPDLRVGVRVKVSSL-EKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTALIAFDDPPDVQIKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDCP 668          
BLAST of mRNA_H-elongata_contig18692.5089.1 vs. uniprot
Match: A0A6H5L2G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G9_9PHAE)

HSP 1 Score: 295 bits (754), Expect = 2.260e-91
Identity = 157/281 (55.87%), Postives = 197/281 (70.11%), Query Frame = 0
Query:    1 ERERDRVAWLAWDEGFRAGEKFCVGDSGAADESVAWLNHLIGGVWGGH---LTGPHARQTSVSGTRSSSA----NRFVFEGLRSFVSEQLAANIAEALEEFNSKSTNVVRVELQEVDLGSSSPQILGVKVLDPVASAAPGWGDGRCGTLGGDCVALRIDLEVATRGLRVGVVVKPSTRGDKALLPTGTVRLLELYLRGSLSVRVELRKEFPFVGMALVAFDGEPDVQVRMEQWGLDALTLG----AVDEWARVGLQGALKPFLLPGYLEVDAAHALCPDCP 270
            ERERDR AWLAWDEG+R G+     D  A  E+ AWLNH++   WGG    +    A    ++G R             +G+ SFV+E L     E LEE   K T+VV VEL +V+LGSS+PQILG+ +LDP +SA+PGWGDGRC +  G+C++ R+DLEVA   LRVGV VK S+  +KALLPTGTVRLLEL+ RGS+SVR ELR EFPFV   L+AFD  PDVQV++EQWGLDAL+LG    AVDEWAR+ LQ A+ P+++PG++EVDAA A+CPDCP
Sbjct:  319 ERERDRAAWLAWDEGYRRGQASRALDPAAEAETTAWLNHILASAWGGTKRVVPRGFAGVNGIAGGRDVHGCVVTGMLAADGMSSFVAEHLTEGFVEVLEEM--KPTSVVGVELLDVELGSSAPQILGITMLDPTSSASPGWGDGRC-SHEGECLSFRVDLEVAAPDLRVGVRVKVSSL-EKALLPTGTVRLLELFFRGSMSVRAELRPEFPFVKTVLIAFDDPPDVQVKLEQWGLDALSLGTVPAAVDEWARMALQQAISPYVMPGFIEVDAASAICPDCP 595          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18692.5089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW85_ECTSI1.830e-9155.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2G9_9PHAE2.260e-9155.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18692contigH-elongata_contig18692:182..1907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18692.5089.1mRNA_H-elongata_contig18692.5089.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18692 182..1907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18692.5089.1 ID=prot_H-elongata_contig18692.5089.1|Name=mRNA_H-elongata_contig18692.5089.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
ERERDRVAWLAWDEGFRAGEKFCVGDSGAADESVAWLNHLIGGVWGGHLT
GPHARQTSVSGTRSSSANRFVFEGLRSFVSEQLAANIAEALEEFNSKSTN
VVRVELQEVDLGSSSPQILGVKVLDPVASAAPGWGDGRCGTLGGDCVALR
IDLEVATRGLRVGVVVKPSTRGDKALLPTGTVRLLELYLRGSLSVRVELR
KEFPFVGMALVAFDGEPDVQVRMEQWGLDALTLGAVDEWARVGLQGALKP
FLLPGYLEVDAAHALCPDCP
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