prot_H-elongata_contig186418.5073.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186418.5073.1
Unique Nameprot_H-elongata_contig186418.5073.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: D7FQU1_ECTSI (Intraflagellar transport particle protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 5.030e-39
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAIP 80
            +VPNTGKEVR+KIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALED LSMKKAFQRL+AIP
Sbjct:  161 QVPNTGKEVRFKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDGLSMKKAFQRLAAIP 234          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S2CJ00_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJ00_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.270e-27
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAIP 80
            ++P TGKE+R+KI RNIG AFVR+GQFQDAI  Y+TIM GN D QTGFNLVLCYYAL D   MK+ F +L +IP
Sbjct:   90 QIPPTGKEIRFKIFRNIGNAFVRLGQFQDAIQSYETIMAGNADFQTGFNLVLCYYALGDADKMKRGFAKLLSIP 163          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S2CJI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJI7_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.160e-27
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAIP 80
            ++P TGKE+R+KI RNIG AFVR+GQFQDAI  Y+TIM GN D QTGFNLVLCYYAL D   MK+ F +L +IP
Sbjct:   90 QIPPTGKEIRFKIFRNIGNAFVRLGQFQDAIQSYETIMAGNADFQTGFNLVLCYYALGDADKMKRGFAKLLSIP 163          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S4HSQ6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HSQ6_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 8.830e-27
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAI 79
            ++PNTG+EVRYKI+RNIG AFVR+GQFQDAI  ++ IM+G+PD QTGFNLVLCYYA  +   MKK F RL ++
Sbjct:   87 QIPNTGREVRYKIMRNIGNAFVRLGQFQDAIASFEQIMEGSPDLQTGFNLVLCYYAAGEKERMKKGFSRLLSV 159          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A835Z9Y6_9STRA (Intraflagellar transport particle protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.650e-26
Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAI 79
            + PNTG EVR KI RNIGTAFVRMGQ+QDAIG Y+T+M G+PD  TG NL+LC+YALED   MK+AFQRL AI
Sbjct:  170 QTPNTGSEVRSKIFRNIGTAFVRMGQYQDAIGAYETVMSGSPDVLTGLNLLLCHYALEDAAQMKRAFQRLVAI 242          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S4B2R6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2R6_CHRCT)

HSP 1 Score: 107 bits (266), Expect = 3.230e-25
Identity = 47/73 (64.38%), Postives = 61/73 (83.56%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAI 79
            ++PNTGKE+++KI+RNIG AFVR+GQFQDA+  Y+ IM+G+PD QTGFNLVLCYYAL D   M+K F RL ++
Sbjct:  263 QIPNTGKEIKHKIVRNIGNAFVRLGQFQDALASYEQIMEGSPDLQTGFNLVLCYYALGDKERMRKGFSRLLSV 335          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A0G4FEP3_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEP3_VITBC)

HSP 1 Score: 106 bits (264), Expect = 6.020e-25
Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAI 79
            ++PNTGKE+RYKI+RNIG AF RMGQF DAI  Y+ IMQGNPD QTGFNL+LCY+AL D   +K+ F RL +I
Sbjct:  248 QIPNTGKEIRYKILRNIGHAFFRMGQFSDAIDAYENIMQGNPDFQTGFNLLLCYFALGDKDKLKQGFTRLLSI 320          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S2DGD4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DGD4_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 8.160e-25
Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAI 79
            ++PNTG+E+RYKI+RNIG AFVR+GQFQDAI  YD IM G+ D QTGFNLVLCYYA  +   MKKAF RL ++
Sbjct:  190 QIPNTGREIRYKIMRNIGNAFVRLGQFQDAIASYDQIMDGSADLQTGFNLVLCYYAAGEKERMKKAFSRLLSV 262          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: F0YAE8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAE8_AURAN)

HSP 1 Score: 105 bits (262), Expect = 1.050e-24
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAIP 80
            ++PNTGK +R+KI RNIG AFVR+GQF DA+  Y+TIM G+PD  TGFNL+LCYYAL D   M++ FQ+L +IP
Sbjct:  178 QIPNTGKHIRFKIFRNIGNAFVRLGQFGDAVQSYETIMGGDPDFHTGFNLILCYYALGDAEKMRRGFQKLISIP 251          
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Match: A0A7S1C9E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9E8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.120e-24
Identity = 49/74 (66.22%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    7 KVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDHQTGFNLVLCYYALEDVLSMKKAFQRLSAIP 80
            ++PNT KE R KI+RNIG AFVRMGQFQDAIG ++ IM+GNP  QTGFNLV+CYYA  D   MKK F +L +IP
Sbjct:  240 QIPNTNKETRLKIMRNIGNAFVRMGQFQDAIGSFEAIMEGNPGFQTGFNLVVCYYARGDADKMKKGFTQLLSIP 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186418.5073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQU1_ECTSI5.030e-3994.59Intraflagellar transport particle protein n=2 Tax=... [more]
A0A7S2CJ00_9STRA1.270e-2767.57Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2CJI7_9STRA4.160e-2767.57Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4HSQ6_9EUKA8.830e-2765.75Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A835Z9Y6_9STRA2.650e-2671.23Intraflagellar transport particle protein n=1 Tax=... [more]
A0A7S4B2R6_CHRCT3.230e-2564.38Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0G4FEP3_VITBC6.020e-2567.12Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2DGD4_9EUKA8.160e-2567.12Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
F0YAE8_AURAN1.050e-2462.16Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S1C9E8_9STRA1.120e-2466.22Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..79
e-value: 1.2E-6
score: 30.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..77
NoneNo IPR availablePANTHERPTHR44117FAMILY NOT NAMEDcoord: 7..79
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 17..50
score: 10.035
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 17..50
score: 9.558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186418contigH-elongata_contig186418:214..638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186418.5073.1mRNA_H-elongata_contig186418.5073.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186418 214..638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186418.5073.1 ID=prot_H-elongata_contig186418.5073.1|Name=mRNA_H-elongata_contig186418.5073.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MIHFTFKVPNTGKEVRYKIIRNIGTAFVRMGQFQDAIGQYDTIMQGNPDH
QTGFNLVLCYYALEDVLSMKKAFQRLSAIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat