prot_H-elongata_contig18618.5059.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18618.5059.1
Unique Nameprot_H-elongata_contig18618.5059.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
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BLAST of mRNA_H-elongata_contig18618.5059.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.090e-47
Identity = 109/181 (60.22%), Postives = 123/181 (67.96%), Query Frame = 0 
Query:   23 GRRGRSELYLVLDAKAFLLATPDRRRLTNGEVRSAAPLIHLAATPDPEDETRLQIRALSHRPVALMRPLTPPRSSTPTAPANPGTGSKSP-SQGGKSTARARVGRGESGSRSPRDGGVAATGGGDAGSMCDMQAWACELVFENARSCRLARKHMEGRRLLLRSEKVSA-NELAERLSRGRG 201
            GRRGRSE+YLVLD KAFLLATPDR RL NGE++S+APL+HLAA  DP D+ RL IRALSH PVALMRP+  PR+STP              S    +T    V    SG+       V ++GGGDAGSMCDMQAWACEL FEN RSCRLARKHME RRL LRSEK     +L E   +GRG
Sbjct: 1294 GRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPXXXXXXXXXXXXXXSSSNVATTEGAV----SGAS------VESSGGGDAGSMCDMQAWACELAFENERSCRLARKHMEDRRLWLRSEKTKCITDLLEACVQGRG 1464
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BLAST of mRNA_H-elongata_contig18618.5059.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 6.670e-45
Identity = 105/185 (56.76%), Postives = 117/185 (63.24%), Query Frame = 0 
Query:   23 GRRGRSELYLVLDAKAFLLATPDRRRLTNGEVRSAAPLIHLAATPDPEDETRLQIRALSHRPVALMRPLTPPRSSTPTAPANPGTGSKSPSQGGKSTARARVGRGESGSRSPRDGGVAATGGG-----DAGSMCDMQAWACELVFENARSCRLARKHMEGRRLLLRSEKVSA-NELAERLSRGRG 201
            GRRGRSE+YLVLD KAFLLATPDR RL NGE++S+APL+HLAA  DP D+ RL IRALSH PVALMRP+  PR+STP +                ST                 G V+          DAGSMCDMQAWACEL FEN RSCRLARKHMEGRRL LRSEK     +L E   +GRG
Sbjct:  842 GRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPRS----------------STGXXXXXXXXXXXXXXXXGAVSXXXXXXXXXXDAGSMCDMQAWACELTFENERSCRLARKHMEGRRLRLRSEKTKCITDLLEACVQGRG 1010
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18618.5059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K768_9PHAE1.090e-4760.22FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FXA7_ECTSI6.670e-4556.76FPL domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18618contigH-elongata_contig18618:3628..5004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18618.5059.1mRNA_H-elongata_contig18618.5059.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18618 697..5004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18618.5059.1 ID=prot_H-elongata_contig18618.5059.1|Name=mRNA_H-elongata_contig18618.5059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MEKGARKRRNGGAAALSVAATAGRRGRSELYLVLDAKAFLLATPDRRRLT
NGEVRSAAPLIHLAATPDPEDETRLQIRALSHRPVALMRPLTPPRSSTPT
APANPGTGSKSPSQGGKSTARARVGRGESGSRSPRDGGVAATGGGDAGSM
CDMQAWACELVFENARSCRLARKHMEGRRLLLRSEKVSANELAERLSRGR
G
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