prot_H-elongata_contig186084.5055.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186084.5055.1
Unique Nameprot_H-elongata_contig186084.5055.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: D7FP41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP41_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 8.770e-27
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    8 QDHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDN 59
            +DHND+CEVCSHGGDLLCCDTC+LVFHTKC RPELK++P GDWNCQFC+ D+
Sbjct:  107 EDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGDWNCQFCVADS 158          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: A0A6H5KSV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 8.790e-27
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    8 QDHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDN 59
            +DHND+CEVCSHGGDLLCCDTC+LVFHTKC RPELK++P GDWNCQFC+ D+
Sbjct:  141 EDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGDWNCQFCVADS 192          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: A0A7S3M305_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M305_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.240e-22
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    4 ATSSQDHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDN 59
            + S  DH++VCEVC  GGDLLCCDTC LVFH KC RP+L  IP+G W+C  CI+D+
Sbjct:   63 SNSFDDHDEVCEVCEKGGDLLCCDTCTLVFHLKCFRPKLSGIPKGSWSCPHCIIDD 118          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: K0SZ98_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ98_THAOC)

HSP 1 Score: 85.5 bits (210), Expect = 7.390e-18
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   10 HNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDN--PNKS 63
            HND+CE C  GGDLLCC TCNLVFH +C RP+L  IPE DW+C +CI     P+K+
Sbjct: 1762 HNDLCETCGLGGDLLCCSTCNLVFHLECTRPKLATIPENDWSCAYCIASGEIPSKT 1817          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: B7FZ99_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ99_PHATC)

HSP 1 Score: 82.4 bits (202), Expect = 8.890e-17
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MNHATSSQDHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDNPNKSA 64
            M+ AT  + HND+CEVC   GDLL C+TCNLVFH  C+RP L+ +PE D+ C +C++    K++
Sbjct:  226 MDTATFVKAHNDLCEVCDEAGDLLMCETCNLVFHVACVRPALETLPEQDYKCAYCVLSTEPKNS 289          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: K0T856_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T856_THAOC)

HSP 1 Score: 82.0 bits (201), Expect = 1.220e-16
Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:   10 HNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIP-EGDWNCQFCIMD 58
            HND+CEVC+  G+LLCC +CNLVFH KC+RP L D P E DWNC +CI D
Sbjct:  383 HNDLCEVCNEPGELLCCGSCNLVFHVKCVRPILTDEPAEDDWNCPYCIAD 432          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: A0A369RVZ2_9METZ (Chromodomain-helicase-DNA-binding protein 3-like protein n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369RVZ2_9METZ)

HSP 1 Score: 82.0 bits (201), Expect = 1.220e-16
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    9 DHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMDNPNKSAGEL 67
            DHND C VC  GG LLCCD+C L +H +CL P L+DIPEGDW C  C+     K   ++
Sbjct:  269 DHNDFCHVCKDGGQLLCCDSCPLSYHLRCLNPPLEDIPEGDWRCPRCLCPRLTKKVEKI 327          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: A0A7S2E5U7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5U7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.310e-16
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   10 HNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCI 56
            HND+CEVC+ GGDLLCC TCNLVFH  C RP LK +P  +W+C +C+
Sbjct:  280 HNDLCEVCNTGGDLLCCATCNLVFHQACSRPVLKKLPPDNWSCAYCV 326          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: A0A7S4QH92_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QH92_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.110e-16
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   10 HNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCI 56
            HND+CEVC+ GGDLLCC TCNLVFH  C RP LK +P  +W+C +C+
Sbjct:  280 HNDLCEVCNTGGDLLCCATCNLVFHQACSRPVLKKLPPDNWSCAYCV 326          
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Match: K0S9D6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9D6_THAOC)

HSP 1 Score: 79.7 bits (195), Expect = 7.870e-16
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   10 HNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDWNCQFCIMD 58
            HND CEVC+  G+LLCC TCNLVFH  C+RP+L   P  DW C FC+ D
Sbjct:  182 HNDACEVCNQPGELLCCSTCNLVFHIDCVRPKLTGDPPDDWACAFCVAD 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186084.5055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP41_ECTSI8.770e-2780.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSV1_9PHAE8.790e-2780.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3M305_9STRA4.240e-2262.50Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
K0SZ98_THAOC7.390e-1860.71Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FZ99_PHATC8.890e-1750.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
K0T856_THAOC1.220e-1666.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A369RVZ2_9METZ1.220e-1652.54Chromodomain-helicase-DNA-binding protein 3-like p... [more]
A0A7S2E5U7_9STRA2.310e-1663.83Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4QH92_9STRA3.110e-1663.83Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0S9D6_THAOC7.870e-1661.22Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 13..56
e-value: 4.3E-10
score: 49.5
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 13..56
e-value: 1.0E-10
score: 41.3
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 11..58
score: 9.882
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..66
e-value: 1.1E-19
score: 71.8
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 3..58
NoneNo IPR availablePANTHERPTHR24102:SF28coord: 3..58
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 14..55
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 8..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186084contigH-elongata_contig186084:362..565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186084.5055.1mRNA_H-elongata_contig186084.5055.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186084 359..565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186084.5055.1 ID=prot_H-elongata_contig186084.5055.1|Name=mRNA_H-elongata_contig186084.5055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MNHATSSQDHNDVCEVCSHGGDLLCCDTCNLVFHTKCLRPELKDIPEGDW
NCQFCIMDNPNKSAGEL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD