prot_H-elongata_contig185925.5044.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig185925.5044.1
Unique Nameprot_H-elongata_contig185925.5044.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
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BLAST of mRNA_H-elongata_contig185925.5044.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 3.920e-9
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:   12 ERHRFNWKIVIMYIIDGRPWAIINGLDMKMLLAELNSAAVATTPSKSTLDRVLDEMYGEGKATLIATLPSLKAEMDRSGYSGGFCGLQLDLTTVANVEYVTITIS 116
            +R   + + VI   I+ RP  +      K+ +  L+   V TT + +T ++VLD +Y   K  ++  L  L+ E    GY G F G  LDLTTVAN EY+T T+S
Sbjct:    9 QRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVS 113
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185925.5044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JXV5_9PHAE3.920e-936.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig185925contigH-elongata_contig185925:547..1038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig185925.5044.1mRNA_H-elongata_contig185925.5044.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig185925 292..1075 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig185925.5044.1 ID=prot_H-elongata_contig185925.5044.1|Name=mRNA_H-elongata_contig185925.5044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MFGKLQVFTGPERHRFNWKIVIMYIIDGRPWAIINGLDMKMLLAELNSAA
VATTPSKSTLDRVLDEMYGEGKATLIATLPSLKAEMDRSGYSGGFCGLQL
DLTTVANVEYVTITISANAKESPNVQFSSDITLLRIHCCTCVVNKKITSF
GAAVLVIGDCRHY*
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