prot_H-elongata_contig18588.5039.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18588.5039.1
Unique Nameprot_H-elongata_contig18588.5039.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length512
Homology
BLAST of mRNA_H-elongata_contig18588.5039.1 vs. uniprot
Match: D8LCG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG8_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 1.490e-112
Identity = 230/531 (43.31%), Postives = 297/531 (55.93%), Query Frame = 0
Query:    1 EQLRGLRSELRHAARAARSTFKEGDRVESRWRRPTRLERPRVDPDAWHAGRVIAVSADGS-IGMVFEDGDRDRLNRIPTTHVRLAP-----------------------GPSLRPPPMNSSNSMPQTQVKHCSSKLDLVC-ASRRELAHVTITTDFLRRSWEDPLTMNQELSRLRRLYEKIIRSRPAWRGSFPTVSFQATKTVPIGGD-------------ATRAVRGGAQYQDRTRKLRHLERYDARCGARRA--------RRPSCVVFHSRGLLAASTRRVGYEKCAKLDLHP--DVNAFDIPETPYSPPL-----------------LVKAQTNLIAAVMAYDRCVSAASDCLQRGVSSFRAARSYSEQQRAFDEVTAYLGPAQRARPGYKDWRGNAIVGLQSTTLDVVEAMNAWAIERAV--------------ISEKAIVAKEKDTCSRGGAHTYKAPPFLWEGLPLVSTIIGHSAKVLERAPELKRWYGPGFPVERNPFFLSYSIDDRPLTPMNALPRTYIEGEV 452
            +Q RGL  E++ A + A +TF+EGDRVESRWRRPTRL++ ++DP AWH GRV+    DG  + +VFEDGD +RL+ I T HVRLAP                       G S R    NS +  P   V   +   +LVC ASR ELAH+   T FLR +WEDP+ ++QE++RLR L E+ +R RP WRGSFP V F ATK +P G               A  A       +DR  + +     D+R   R          + P+ V    R       +  G ++C   D +   + NA    +   S                    L++AQ  L++A +AYDR V+ A DCL RG ++FR AR+YSEQQ+AF+E TA LGPAQ AR GY DWRG+ +VGLQS TLDVVEAM+AWA E A                +E+ +V K+        A    APPFLWEG PLVSTIIG SAK++  APELK WYGPGFP+ERNPFFL+Y +DDRP+TP +AL R ++ GEV
Sbjct:  331 QQSRGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKDGGRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXXXXXXXXXXXVMAAGVSGR---RNSCDRRPSC-VPTSAPTDELVCSASRGELAHIACATKFLRCTWEDPVPISQEMARLRMLEERKMRGRPEWRGSFPLVDFSATKRLPFGAGGMARTGGRRARNAAASAATAAVATRDRQLQAQGTVHDDSRTRLRTVQWSPSSSLKMPTTVPQVHREENIDRDQGQG-DRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXGATALLEAQAKLVSAALAYDRYVAGARDCLDRGCAAFRLARTYSEQQKAFEESTAILGPAQPARAGYTDWRGSPVVGLQSATLDVVEAMDAWAAEWAADKGGKPDTGGGGNAFAEEGVVLKDGAVAEVAVA----APPFLWEGSPLVSTIIGQSAKLVAGAPELKGWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 852          
BLAST of mRNA_H-elongata_contig18588.5039.1 vs. uniprot
Match: A0A6H5JB67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB67_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 6.400e-110
Identity = 225/537 (41.90%), Postives = 293/537 (54.56%), Query Frame = 0
Query:    1 EQLRGLRSELRHAARAARSTFKEGDRVESRWRRPTRLERPRVDPDAWHAGRVIAVSADGS-IGMVFEDGDRDRLNRIPTTHVRLAPGPSLRPPPMNSSNSMPQTQV---------KHCSSK---------LDLVCAS-RRELAHVTITTDFLRRSWEDPLTMNQELSRLRRLYEKIIRSRPAWRGSFPTVSFQATKTVPIGGD-------------ATRAVRGGAQYQDRTRKLRHLERYDARCGARRA--------RRPSCVVFHSRGLLAASTRRVGY-EKCAKLDLHP--DVNAFDIPETPYSPPL------------------------LVKAQTNLIAAVMAYDRCVSAASDCLQRGVSSFRAARSYSEQQRAFDEVTAYLGPAQRARPGYKDWRGNAIVGLQSTTLDVVEAMNAWAIERAVISEKAIVAKEKDTCSRGGAHTYK-----------------APPFLWEGLPLVSTIIGHSAKVLERAPELKRWYGPGFPVERNPFFLSYSIDDRPLTPMNALPRTYIEGEV 452
            +Q +GL  E++ A + A +TF+EGDRVESRWRRPTRL++ ++DP AWH GRV+     G  + +VFEDGD +RL+ I T HVRLAP           S+      V           C  +          +LVC++ RRELAH+   T  LR +WE P+ ++QE++RLR L E+ +RSRP WRGSFP V F ATK +P G               A  AV      +D   + +   R D+R   R          + P  V    R       R +G  ++C   D +   + NA    +   S                           L+ AQ  L++A +AYDRCV+   DCL RG ++FR AR+YSEQQ+AF+E TA LGPAQ AR GYKDWRG+ +VGLQS TLDVVEAM+ WA E AV       AK   T + GG + +                  APPFLWEG PLVST+IG SAK++  APELK WYGPGFP+ERNPFFL+Y +DDRP+TP +AL R ++ GEV
Sbjct:  249 QQSQGLHLEMKRAMKVATTTFREGDRVESRWRRPTRLDKAKIDPGAWHPGRVVQSHKGGDRVDVVFEDGDGERLSGISTKHVRLAPPXXXXXXXXLVSSGRDDDYVTAAGVTGRRNSCDRRPSCAPTPAPTELVCSAIRRELAHIACATKSLRCTWEVPVPISQEMARLRMLEERKMRSRPEWRGSFPLVDFSATKRLPFGAGGMARTVVRKVKNTAASAVSAVLATRDHQLQAQSTVRDDSRTRLRTVQSSPSSSLKMPMTVPQVQRD--ENDDRDLGQGDRCTSTDDNTVKETNARSAGKRRSSXXXXXXXXXXXXXXXXXXXXXXXXXTALLAAQAKLVSAAVAYDRCVAGVRDCLDRGCAAFRLARTYSEQQKAFEESTATLGPAQPARAGYKDWRGSPVVGLQSATLDVVEAMDDWAAEWAV-------AKGGKTDAGGGDNAFAEEGVVLKDGAVEEVAVAAPPFLWEGSPLVSTVIGQSAKLVAGAPELKEWYGPGFPIERNPFFLAYPVDDRPVTPRSALVRAWVNGEV 776          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18588.5039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCG8_ECTSI1.490e-11243.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB67_9PHAE6.400e-11041.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 14..87
e-value: 1.3E-5
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18588contigH-elongata_contig18588:4794..6605 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18588.5039.1mRNA_H-elongata_contig18588.5039.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18588 4794..6605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18588.5039.1 ID=prot_H-elongata_contig18588.5039.1|Name=mRNA_H-elongata_contig18588.5039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=512bp
EQLRGLRSELRHAARAARSTFKEGDRVESRWRRPTRLERPRVDPDAWHAG
RVIAVSADGSIGMVFEDGDRDRLNRIPTTHVRLAPGPSLRPPPMNSSNSM
PQTQVKHCSSKLDLVCASRRELAHVTITTDFLRRSWEDPLTMNQELSRLR
RLYEKIIRSRPAWRGSFPTVSFQATKTVPIGGDATRAVRGGAQYQDRTRK
LRHLERYDARCGARRARRPSCVVFHSRGLLAASTRRVGYEKCAKLDLHPD
VNAFDIPETPYSPPLLVKAQTNLIAAVMAYDRCVSAASDCLQRGVSSFRA
ARSYSEQQRAFDEVTAYLGPAQRARPGYKDWRGNAIVGLQSTTLDVVEAM
NAWAIERAVISEKAIVAKEKDTCSRGGAHTYKAPPFLWEGLPLVSTIIGH
SAKVLERAPELKRWYGPGFPVERNPFFLSYSIDDRPLTPMNALPRTYIEG
EVTTTASTTLLAERKEAALKAVLDKQAAAPSWWPAKGGMVNKAHYGRIRQ
AEKVLLREERNV
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