prot_H-elongata_contig185787.5034.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig185787.5034.1
Unique Name	prot_H-elongata_contig185787.5034.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	156

Homology

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.630e-56
Identity = 94/149 (63.09%), Postives = 112/149 (75.17%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            I+  +V I CFSH+FNNIG RL+ PD+D FLGKL+TLL+HSP AKALF E  GV  P TP HRWGSRYE D  +A+NWPGVVKF+  Y+S DD KSKT  W+R+EL R R DG+ Q  VL+ QLA++VDVG  VT A IFLEGD PL+ 
Sbjct:  171 IYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPLLH 319

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.290e-51
Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            I+  ++ + CFSH+FNNIGKRL  PDL+ FLGKL+TLL+HSP AKAL  E  GVA P TP HRWGSR+E D  +A+N PGVVKF+  ++S D+ KS+T  W+R+EL R R DG+ Q  VL+ QLA++VDVG  VT   IFLEGD PL+ 
Sbjct:  171 IYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGDEPLLH 319

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.830e-51
Identity = 90/149 (60.40%), Postives = 112/149 (75.17%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            +F  A+ I C SH FNNIGK+L + DLDAFLGK++TLL+HS  AKALF E+ GV APSTPGHRWGSR++ D  +A+NWPGV++F+A Y S D  KSK  K+MR+EL R R D + Q+  L+ QLA+MVDVG  VT+ATI LEGD PL  
Sbjct:  338 LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSVTSATIVLEGDEPLAH 486

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JRY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 3.840e-51
Identity = 86/149 (57.72%), Postives = 108/149 (72.48%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            +F  AV I C SH F+NI K+L  P+LD F+GK++TL +HS  AKALF E+ GV APSTPGHRWGSR++ D  +A+NWPGV+KF+A Y S D  KSK  K+MR+EL R R D + Q+ VL+  LA+MVDVG  VT+ATI LEGD P   
Sbjct:   51 LFRYAVVIGCLSHTFHNIAKQLCTPELDTFIGKMHTLPSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLKFIAAYESADTDKSKAAKFMRDELVRVRDDNKAQSLVLQLHLALMVDVGRSVTSATIVLEGDEPFAH 199

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR7_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.670e-49
Identity = 89/149 (59.73%), Postives = 110/149 (73.83%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            +F  A+ I C SH FNNIGK+L  P+L  FLGK++ LL HS  AKALF E+  V APSTPGHRWGSR++ D  +A+NWPGV++F+A Y+S D  KSK  K+MR+EL R R D   Q+ VL+ QLA+MVDVG  VT+ATI LEGD PLVR
Sbjct:  535 LFRYAIVIGCLSHTFNNIGKQLSTPELGTFLGKMHALLLHSAGAKALFKEKVRVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYKSGDTDKSKAAKFMRDELVRFRDDKTPQSLVLQLQLALMVDVGRSVTSATIVLEGDEPLVR 683

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5KX52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX52_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.540e-49
Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSP 147
            +F  AV I C    FNNI K+L  P+LD FLGK++TLL+HS  AKALF E+ GV APSTPGHRWGSR++ D  +A+NWPGV+KF+A Y S D  KSK  K+MR+EL R R D + Q+ VL+  LA+MVDVG  VT+ATI LEGD P
Sbjct:  185 LFRYAVVISCLPPTFNNIAKQLCTPELDTFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLKFIAAYESADTDKSKAAKFMRDELVRVRDDNKAQSLVLQLHLALMVDVGCSVTSATIVLEGDEP 330

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP4_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 5.490e-47
Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            +F  A+ I C SH FNN   +L  P+LD F GK++TLL+HS  AKALF E+ GV A STPGHRWGSR++ D  +A+NWPGV++F+A Y SED  KS   K+MR+EL R R D   Q+ +L+ Q A+MVDVG  VT+ATI LEGD PL +
Sbjct:   31 LFRYAIVIGCLSHTFNN---QLSTPELDTFRGKMHTLLSHSAGAKALFKEKVGVRAQSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYESEDTDKSNAAKFMRDELVRVRDDKNPQSLILQLQQALMVDVGRSVTSATIVLEGDEPLAQ 176

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 9.770e-46
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0

Query:    1 IIFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR 150
            ++F  AV I CFSH FNNIGK+L   ++D FLGKL+TLL+HS  AK LF +E GV AP TPGHRWGSR+E DE +A+NWPG VKF                 MR++L + R DG+ Q+ VL+ QLA+ VDVG  +T+ATIFLEGD PL  
Sbjct:   50 LVFRFAVVIPCFSHTFNNIGKQLVCEEIDVFLGKLHTLLSHSAFAKDLFRKEVGVRAPETPGHRWGSRFERDEVIAVNWPGAVKF-----------------MRDDLAKLRDDGKAQSLVLQLQLALTVDVGRIITSATIFLEGDMPLAH 182

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 2.410e-43
Identity = 82/137 (59.85%), Postives = 103/137 (75.18%), Query Frame = 0

Query:    2 IFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVG--AHVT 136
            +F  A+ I C SH FNNIGK+L + DLDAFLGK++TLL+HS  AKALF E+ GV APSTPGHRWGSR++ D  +A+NWPGV++F+A Y S D  KSK  K+MR+EL R R D + Q+  L+ QLA+MVDVG  AH T
Sbjct:  435 LFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSAHKT 571

[Close]

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Match: A0A6H5K4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R7_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.080e-42
Identity = 77/134 (57.46%), Postives = 100/134 (74.63%), Query Frame = 0

Query:    6 AVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFLEEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTVKWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNAT 139
            A+ I C SH FNNIGK+L   +LD FLGK++TLL+HS  +KALF E+ GV APSTPGHRWGSR++ D  +A+NWPGV++F+A Y + D  KSK  K+MR+EL + R D   Q+  L+ QLA+MVDVG  VT+AT
Sbjct:  444 AIVIGCLSHTFNNIGKQLSTQELDTFLGKMHTLLSHSAGSKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYENGDTDKSKAAKFMRDELVQFRDDKNPQSLFLQLQLALMVDVGRSVTSAT 577

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot

BLAST of mRNA_H-elongata_contig185787.5034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5L6R8_9PHAE	1.630e-56	63.09	Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec...	[more]
A0A6H5JN03_9PHAE	2.290e-51	58.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JD81_9PHAE	3.830e-51	60.40	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRY7_9PHAE	3.840e-51	57.72	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJR7_9PHAE	2.670e-49	59.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KX52_9PHAE	7.540e-49	59.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCP4_9PHAE	5.490e-47	55.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JZH8_9PHAE	9.770e-46	54.67	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KTX0_9PHAE	2.410e-43	59.85	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K4R7_9PHAE	5.080e-42	57.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 8..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig185787	contig	H-elongata_contig185787:753..1220 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig185787.5034.1	mRNA_H-elongata_contig185787.5034.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig185787 753..1220 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig185787.5034.1 ID=prot_H-elongata_contig185787.5034.1|Name=mRNA_H-elongata_contig185787.5034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
IIFNNAVPIRCFSHMFNNIGKRLKAPDLDAFLGKLYTLLAHSPLAKALFL
EEAGVAAPSTPGHRWGSRYECDERLALNWPGVVKFVAKYRSEDDVKSKTV
KWMRNELERTRPDGRKQAAVLKTQLAMMVDVGAHVTNATIFLEGDSPLVR
IVHIP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf