prot_H-elongata_contig18573.5031.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18573.5031.1
Unique Nameprot_H-elongata_contig18573.5031.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length249
Homology
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A6H5LAX6_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAX6_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.550e-46
Identity = 99/255 (38.82%), Postives = 148/255 (58.04%), Query Frame = 0
Query:    1 MIGALLAKLVEILLDQQEEMLLDILKRRQP---RRGMWGGDRETFAIGWWGVLRRSFSS-------------LRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFVEFDEVSAERDTNNDGIIDMHEI 239
            M+ A L+KLVE+LLD+Q    L +++        + M     +T     WG    +  +             +  +N  +V+VG G+ +FV L+  G  +F     +S +DAFYLTVVS+STVGYGD+ P +T T++F IF+LP+STLLL KVISDYTEM       + Q R+LL+ ++  ++  MD + D +V   E++V  L++QEK+TQE+I+ +   F  LD D +GFV  DE+  ERD + DG I   E+
Sbjct:  198 MVAAFLSKLVELLLDKQAGRRLSMIRGMVALVVAQAMGVDYPDTAMKTQWGSGATNGGTPAAQQDTAGDNDDIALVNSINVEVGLGVFYFVLLVGVGTTVFMVYGHMSVIDAFYLTVVSSSTVGYGDYFPSSTGTRLFAIFFLPLSTLLLGKVISDYTEMQANKRVKQRQTRLLLATVTAREYSAMDADNDNRVSLMEFMVHTLIKQEKVTQEDIEEIHTRFTALDKDHNGFVTRDEIGEERDKDGDGFIGADEL 452          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A2V3ITP7_9FLOR (Two pore potassium channel c n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP7_9FLOR)

HSP 1 Score: 105 bits (261), Expect = 7.060e-23
Identity = 65/218 (29.82%), Postives = 118/218 (54.13%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSF--SSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFV 217
            I A+L  +V +L+D+QEE+L++ ++         GGD ++ +       +     S +R+L          I+  + ++  GV +F     LS ++A Y+TV+SASTVG+GD  P    +K+ +  +L  ST+  AKV++D   M  +      Q+R++ +++       MD++RD +VDK E+L + L+R  K+ ++E+  +   F  LD D SG++
Sbjct:  144 ISAVLGHIVGMLIDRQEELLINAME---------GGDEDSDSDNEIQARKGLVDESDIRQLV-------VSISTLLVILAMGVVVFMRLEKLSLLNALYVTVISASTVGFGDLQPTRNVSKMIMTIWLCFSTICAAKVVADVAAMVAKMKQKAVQRRLMSARMDIRTLVGMDKDRDNRVDKTEFLAQMLIRSGKVEEDEVQELLKRFDELDVDNSGYI 345          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: R7QMR7_CHOCR (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMR7_CHOCR)

HSP 1 Score: 100 bits (249), Expect = 4.760e-21
Identity = 62/222 (27.93%), Postives = 120/222 (54.05%), Query Frame = 0
Query:    1 MIGALLAKLVEILLDQQEEMLLDILKR---RQPRRGMWGGDRETFAI---GWWGVLRRSFSSLRKLN-PYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESG 215
            ++  +L+ L+ +LLD+QEE+LL  + R     P   M   D             +  R  ++ + L+   +  +G  + +    +  G+ +F    +L+ +DA Y T++SASTVG+GD+ P   +TK+ +  +L  ST+ + K+++D+T+  V+A      +R+L + ++      +D ++DG VDK E+L + L+R  K+ Q+++D +   F  LD + +G
Sbjct:  144 LVSTMLSYLIGLLLDRQEEVLLAAIVRDRDEDPVSEMRTADGSVDVEEPPSTASINERIMNATKSLDISDYCGLGFAVGFLGLALAVGMLVFMGLENLAPIDAAYATIISASTVGFGDYEPTRNSTKVIMTVWLCFSTIAVGKLVADFTDANVKAKQRDVSRRLLTATMNVESIRNLDMDKDGSVDKCEFLTQMLVRSGKVEQKDLDAILLRFDQLDKNSNG 365          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A817A7A8_BRANA ((rape) hypothetical protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A817A7A8_BRANA)

HSP 1 Score: 90.9 bits (224), Expect = 2.840e-18
Identity = 68/216 (31.48%), Postives = 109/216 (50.46%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFV 217
            I  LL+ +V  +LD QE  +LD  KRR+         R ++ I     +++    +R      +KV   +   V+ I  GV I      + ++D+FYL+V+S +TVGYGD + KT   ++F   +L VSTL +A+      E  V+  N    KR+L   +S + F   D + +G V K EY++ +L   EKIT ++I  +   F  LD   +G +
Sbjct:   41 IDILLSGMVSYVLDLQESYMLDSAKRREEP-----DKRRSYIID----VKKGRMRIR------LKVALALGVVVSCIALGVGIMHFIEKIDWLDSFYLSVMSVTTVGYGDRAFKTLPGRLFAAVWLLVSTLAVARAFLYLAEARVDKRNRERAKRVLCETMSVSQFFAADIDNNGCVSKAEYVIYKLKEMEKITDKDITPISKQFDKLDRCSNGKI 241          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: UPI0010360C7B (two-pore potassium channel 3-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010360C7B)

HSP 1 Score: 92.8 bits (229), Expect = 3.550e-18
Identity = 67/229 (29.26%), Postives = 110/229 (48.03%), Query Frame = 0
Query:    1 MIGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSF--SSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFVEFDEVSAERD 227
            ++  LL  LV  +LD+QE +LL  +   Q                 +  + R++     +      +KVG  +A  V  I  G         +S+VD+FYL+V S +TVGYGD++  T A + F I +L VSTL +A+     TE+ ++  N R  K +L  K++  D    D + DG + K EY++ +L    KI +++I ++   F  LD    G +   ++  E D
Sbjct:  184 LVDILLNGLVTYILDRQEAVLLSTVDENQ-----------------FNTMVRAYVIDPAKGRMRIRMKVGLALAVVVGCIAIGTVTVHLLEDMSWVDSFYLSVTSVTTVGYGDYAFTTLAGRCFAIIWLLVSTLAVARAFLYLTELRIDKRNRRIAKWVLQKKMTLGDLVAADLDHDGSISKSEYIIYKLREMGKIAEKDIMQICTQFDTLDNTNCGRLTIADLMEESD 395          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A5J5A522_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A522_9ASTE)

HSP 1 Score: 92.4 bits (228), Expect = 4.650e-18
Identity = 66/214 (30.84%), Postives = 105/214 (49.07%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESG 215
            +  LL  LV  +LD QE +LL  +   +    +      T+ I           + +      +KVG  +A  ++ I  G         +S+VD+FYL+V S +TVGYGD++ KT   + F I +L VSTL +A+     TE+ ++  N +  K IL  K++  D    D + DG + K EY++ +L    KIT+++I  + N F  LD    G
Sbjct:  180 VDILLNGLVTYILDMQEAVLLSTVYENKSNTMV-----RTYMI----------DTAKGRMRIRMKVGLALAVVISCIAIGTVSVHFLEEMSWVDSFYLSVTSVTTVGYGDYAFKTLTGRCFAIVWLLVSTLAVARAFLYLTELRIDKRNRKIAKWILQKKMTLGDLVAADLDHDGSISKSEYIIYKLKEMGKITEKDIMLICNQFDTLDHSNCG 378          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A6P6SDV1_COFAR (two-pore potassium channel 3-like n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6SDV1_COFAR)

HSP 1 Score: 92.4 bits (228), Expect = 4.680e-18
Identity = 64/215 (29.77%), Postives = 105/215 (48.84%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNP-YHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESG 215
            I  LL  LV  +LD+QEE+LL  +   +                   V R       K      +KVG  +A  V  I  G  +       +++D+FYL+V S +TVGYGD++  T   + F I +L VSTL +A+     TE+ ++  N +  K +L  K++  D    D + +G + K EY++ +L    KI +++I ++ N F +LD++  G
Sbjct:  181 IDILLHGLVTYVLDRQEEVLLSTVDENRLN----------------AVFRAYMIDTAKGRMRIRIKVGLALAVVVGCIAIGTVMVHKLEEQNWIDSFYLSVTSVTTVGYGDYAFSTLQGRCFAIIWLLVSTLAVARAFLYLTELRIDRRNRKIAKWVLQKKMTPGDLVAADLDHNGSISKSEYVIYKLKEMGKIAEKDIQQICNQFDMLDSNHCG 379          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A834GNZ6_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GNZ6_RHOSS)

HSP 1 Score: 92.4 bits (228), Expect = 5.100e-18
Identity = 65/214 (30.37%), Postives = 107/214 (50.00%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESG 215
            I  LL+ LV  +LD+QE +LL  +   Q    +      T+ I           + +      +KVG  +A  V  I  G    +    L++VD+FYL+V S +TVGYGD++  T   + F I +L VSTL +A+     TE+ ++  N +  K +L  K++  D    D + DG + K EY++ +L    KI ++++ ++ N F +LD    G
Sbjct:  192 IDILLSGLVTYVLDRQEAVLLSTMDANQLNSMV-----RTYMI----------DTAKGRMRIRIKVGLALAVVVGCIAIGTFTARYLEGLTWVDSFYLSVTSVTTVGYGDYAFTTATGRGFAIIWLLVSTLAVARAFLYLTELRIDKRNRKIAKWVLQRKMTLGDLVAADLDHDGSISKSEYIIYKLKEMGKIAEKDLMQICNQFDMLDNTNCG 390          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: A0A8B8NB92_9MYRT (two pore potassium channel c-like n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8NB92_9MYRT)

HSP 1 Score: 91.7 bits (226), Expect = 9.110e-18
Identity = 63/218 (28.90%), Postives = 108/218 (49.54%), Query Frame = 0
Query:    2 IGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNPYHV--KVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFV 217
            +  LL  +V  + D+QE +LL  + + Q                 +  + R++   R+     +  KV   +A  ++ I  G  +      LS+VD+FYL+V S +TVGYGD++  T A + F I +L +STL +A+     TE+ ++  N R  K +L  K++  D    D + DG + K EY+V +L    KI +++I  + N F ++D    G +
Sbjct:  187 VDILLHGMVTYICDRQEAVLLSTVDQNQ-----------------FNAMVRTYMIDREKGRMRIRMKVCVALAVVISCIAIGTIVVHFIEDLSWVDSFYLSVTSVTTVGYGDYAFTTLAGRCFAIIWLLISTLAVARAFLYLTELRIDKRNRRIAKWVLQRKMTLGDLVAADLDNDGSISKAEYVVYKLKEMGKIAEKDIVPICNQFDIIDNSNCGKI 387          
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Match: UPI00053C8A95 (two-pore potassium channel 3-like isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C8A95)

HSP 1 Score: 91.7 bits (226), Expect = 1.170e-17
Identity = 66/212 (31.13%), Postives = 109/212 (51.42%), Query Frame = 0
Query:    6 LAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVLRRSFSSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLTVVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANNTRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEIDRVWNHFKLLDTDESGFV 217
            L+ +V  +LD QE  +L  +K          GD    A  +   +++    +R      +KVG  +   V  I FGV I      L ++D+FYL+V+S +TVGYGD + KT   ++F   +L VSTL +A+     TE  V+  N +  K++L   ++ A F   D + +G V K EY++  L    KI++++I  + + F  LDT+ +G +
Sbjct:  227 LSGMVTYVLDLQESYMLKAVKP---------GDERDKARSYIIDVKKGRMRIR------LKVGLALGVVVLCIGFGVGIMHFIEKLGWLDSFYLSVMSVTTVGYGDHAFKTLPGRLFAAIWLLVSTLAVARAFLYLTEARVDKRNRKRAKKVLCENMTVAQFFAADIDNNGCVSKAEYVIYMLKEMGKISEKDITPISSQFDRLDTNNNGKI 423          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18573.5031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LAX6_9PHAE3.550e-4638.82EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A2V3ITP7_9FLOR7.060e-2329.82Two pore potassium channel c n=1 Tax=Gracilariopsi... [more]
R7QMR7_CHOCR4.760e-2127.93EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
A0A817A7A8_BRANA2.840e-1831.48(rape) hypothetical protein n=1 Tax=Brassica napus... [more]
UPI0010360C7B3.550e-1829.26two-pore potassium channel 3-like n=1 Tax=Camellia... [more]
A0A5J5A522_9ASTE4.650e-1830.84Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
A0A6P6SDV1_COFAR4.680e-1829.77two-pore potassium channel 3-like n=2 Tax=Coffea T... [more]
A0A834GNZ6_RHOSS5.100e-1830.37Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
A0A8B8NB92_9MYRT9.110e-1828.90two pore potassium channel c-like n=7 Tax=Myrtoide... [more]
UPI00053C8A951.170e-1731.13two-pore potassium channel 3-like isoform X1 n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 51..146
e-value: 2.0E-17
score: 64.9
NoneNo IPR availableGENE3D1.10.238.10coord: 147..246
e-value: 1.1E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR11003:SF282TWO-PORE POTASSIUM CHANNEL 3coord: 3..218
NoneNo IPR availablePANTHERPTHR11003POTASSIUM CHANNEL, SUBFAMILY Kcoord: 3..218
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 49..157
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 166..180
e-value: 0.0047
score: 16.4
coord: 227..240
e-value: 0.062
score: 12.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 158..193
score: 5.28
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 197..232
score: 8.683
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 74..144
e-value: 5.1E-14
score: 52.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 210..222
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 171..183
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 166..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18573contigH-elongata_contig18573:2307..5955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18573.5031.1mRNA_H-elongata_contig18573.5031.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18573 2214..7181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18573.5031.1 ID=prot_H-elongata_contig18573.5031.1|Name=mRNA_H-elongata_contig18573.5031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp
MIGALLAKLVEILLDQQEEMLLDILKRRQPRRGMWGGDRETFAIGWWGVL
RRSFSSLRKLNPYHVKVGAGIAWFVALIMFGVAIFKSSMSLSFVDAFYLT
VVSASTVGYGDFSPKTTATKIFVIFYLPVSTLLLAKVISDYTEMTVEANN
TRNQKRILLSKLSKADFDKMDENRDGKVDKWEYLVRQLLRQEKITQEEID
RVWNHFKLLDTDESGFVEFDEVSAERDTNNDGIIDMHEIRSARNLETR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR013099K_chnl_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair