prot_H-elongata_contig185142.5000.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig185142.5000.1
Unique Nameprot_H-elongata_contig185142.5000.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length36
Homology
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BLAST of mRNA_H-elongata_contig185142.5000.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 4.940e-8
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    3 QVLTPRLGFDLSLRQANAYTRERAALVGDAAHTV 36
            +V+TPRLGFDLSLRQA+ YT +R ALVGDAAHTV
Sbjct:  442 EVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTV 475
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BLAST of mRNA_H-elongata_contig185142.5000.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 9.250e-8
Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:    2 LQVLTPRLGFDLSLRQANAYTRERAALVGDAAHTV 36
            ++V+TPRLGFDLSLRQA+ YT  R ALVGDAAHTV
Sbjct:  343 VEVVTPRLGFDLSLRQAHRYTGARMALVGDAAHTV 377
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185142.5000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1J7_ECTSI4.940e-879.41Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A0A6H5KUH3_9PHAE9.250e-877.14FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.9.50coord: 3..12
e-value: 1.2E-6
score: 29.9
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 13..36
e-value: 1.2E-6
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig185142contigH-elongata_contig185142:772..879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig185142.5000.1mRNA_H-elongata_contig185142.5000.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig185142 772..879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig185142.5000.1 ID=prot_H-elongata_contig185142.5000.1|Name=mRNA_H-elongata_contig185142.5000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
MLQVLTPRLGFDLSLRQANAYTRERAALVGDAAHTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf