prot_H-elongata_contig185058.4996.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig185058.4996.1
Unique Nameprot_H-elongata_contig185058.4996.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.660e-19
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MKTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            +KTI C+DT WSVIS DFSPDEKWLAYSSW PYVHLCNTRG
Sbjct:  290 LKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 330          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.660e-19
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 MKTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            +KTI C+DT WSVIS DFSPDEKWLAYSSW PYVHLCNTRG
Sbjct:  354 LKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 394          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A835ZBR0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBR0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.470e-14
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            KTI C D GW+V+  DFSPD++WLAYSSW  YVHLCN +G
Sbjct:  305 KTIVCRDVGWAVVGTDFSPDDQWLAYSSWSQYVHLCNVQG 344          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A2P6NFA9_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NFA9_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 1.000e-11
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 MKTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            +K I   + GWS+I  D+SPD++WL YSSW PY+HLCN +G
Sbjct:  136 VKVIQARNIGWSIIDTDYSPDKRWLIYSSWSPYIHLCNIQG 176          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A2P6NAE7_9EUKA (WD repeat domain 23 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NAE7_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 3.200e-10
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            K I   + GWS+I  D+SPD++WL YSSW  Y+HLCN  G
Sbjct:  194 KEIQARNIGWSIIDTDYSPDQRWLIYSSWSEYIHLCNITG 233          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A6A7GBQ5_9CRUS (DDB1-and CUL4-associated factor 11-like isoform X2 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GBQ5_9CRUS)

HSP 1 Score: 60.5 bits (145), Expect = 1.530e-9
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            ++I  +DTGWS+I  D+SPD++W+AYSSW   +HL N  G
Sbjct:  169 RSISGLDTGWSIIDLDYSPDQRWIAYSSWSTIIHLVNVYG 208          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A8J4V637_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V637_9MYCE)

HSP 1 Score: 58.9 bits (141), Expect = 5.320e-9
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            K+I   D  WS+I  D+SPD+ WL YSSW PY+ LC  + 
Sbjct:  299 KSIEARDINWSIIDTDYSPDQNWLVYSSWSPYIQLCKIKS 338          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: A0A4D9D5A2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5A2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.230e-9
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            K IHC   GW+++ + FSPD KW+AYSSW   +HL NT G
Sbjct:  113 KQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFG 152          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: W7TW78_9STRA (Ddb1-and cul4-associated factor 11 isoform 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW78_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.290e-9
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    2 KTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            K IHC   GW+++ + FSPD KW+AYSSW   +HL NT G
Sbjct:  238 KQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFG 277          
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Match: F4Q142_CAVFA (WD40 repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q142_CAVFA)

HSP 1 Score: 57.0 bits (136), Expect = 2.540e-8
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    4 IHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG 41
            +H     WS+I  DFS D+++  YSSW PY+H+CNT G
Sbjct:  176 VHARYVSWSIIDTDFSQDQQFFIYSSWSPYIHICNTNG 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185058.4996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LKU7_ECTSI2.660e-1985.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A5_9PHAE2.660e-1985.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBR0_9STRA9.470e-1467.50WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A2P6NFA9_9EUKA1.000e-1156.10Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A2P6NAE7_9EUKA3.200e-1055.00WD repeat domain 23 n=1 Tax=Planoprotostelium fung... [more]
A0A6A7GBQ5_9CRUS1.530e-952.50DDB1-and CUL4-associated factor 11-like isoform X2... [more]
A0A8J4V637_9MYCE5.320e-950.00Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A4D9D5A2_9STRA7.230e-955.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TW78_9STRA7.290e-955.00Ddb1-and cul4-associated factor 11 isoform 1 n=1 T... [more]
F4Q142_CAVFA2.540e-850.00WD40 repeat-containing protein n=1 Tax=Cavenderia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig185058contigH-elongata_contig185058:734..859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig185058.4996.1mRNA_H-elongata_contig185058.4996.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig185058 728..859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig185058.4996.1 ID=prot_H-elongata_contig185058.4996.1|Name=mRNA_H-elongata_contig185058.4996.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MKTIHCIDTGWSVISADFSPDEKWLAYSSWCPYVHLCNTRG*
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