prot_H-elongata_contig184815.4983.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184815.4983.1
Unique Nameprot_H-elongata_contig184815.4983.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.260e-61
Identity = 124/229 (54.15%), Postives = 139/229 (60.70%), Query Frame = 0
Query:    1 MMDTIKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESD----------------------------ATP----------------------------APSHLEADAFWLFSAVMTGLEGFYEHGG-VVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            M DTIKADLERL+PTGCG+HFLAPARQ+LLLSVLS+WADL+  T YRQGMHEVLAPL+L LEKEVAAATRA     ++AG+S                             A+P                             P  LEADAFWLFSAVM+GLE FYEHG    S     AG G G G  VDSPV+EMCKRLQG R+R ADPELQ+HL+HLDISPQ   L
Sbjct:  133 MTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRA----EAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAGYL 357          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A194XLJ2_9HELO (RabGAP/TBC n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194XLJ2_9HELO)

HSP 1 Score: 100 bits (250), Expect = 1.380e-21
Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 0
Query:    8 DLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRR--RPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            D+ER  P     +F +P  Q++LL +L ++  ++ D GYRQGMHEVLAP++  +E++        D  + +    DAT    ++E DAF L S +M   + FYE      DRR   P GGG    +G  SP++E  KR+    L   DPEL KHL+ +++ PQ+ L+
Sbjct:  119 DVERCMPEE--PYFRSPETQRMLLDILFIFCKINQDVGYRQGMHEVLAPILWVVEQDAIENAPQKDQNSVMEQILDAT----YIEHDAFTLLSLIMRSAKSFYEL--AEPDRRVSTPLGGGKSPEQGA-SPIVERSKRIHEVYLARLDPELAKHLSDIEVLPQIFLI 276          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A8H4RWE6_9HELO (Rab-GAP TBC domain-containing protein n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4RWE6_9HELO)

HSP 1 Score: 99.0 bits (245), Expect = 6.510e-21
Identity = 65/174 (37.36%), Postives = 96/174 (55.17%), Query Frame = 0
Query:    5 IKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPA----PSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGG--RGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            I  D+ER  P    E+F  P  Q++LL +L ++  ++ D GYRQGMHEVLAP++  +E++   A     HE +   ESD        P+++E DAF + S VM   + FYE G    DR+  A   + G   +G  SP++E  KR+    L   DPEL KHL  +++ PQ+ L+
Sbjct:  112 IYQDVERCMPEE--EYFRQPETQRILLDILFVFCKINQDVGYRQGMHEVLAPILWVVEQD---AIDRECHEQTSESESDFLMKEMLDPTYIEHDAFTILSLVMRSAKSFYELG--EPDRKPSASSSMAGTPQQGA-SPIVERSKRIHEVYLARLDPELAKHLTDIEVLPQIFLI 277          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A8H6L6E1_9LECA (Rab-GAP TBC domain-containing protein n=2 Tax=Letharia TaxID=112415 RepID=A0A8H6L6E1_9LECA)

HSP 1 Score: 98.2 bits (243), Expect = 1.200e-20
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 0
Query:    8 DLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            D+ER  P     +F  P  QK+LL +L ++  L+ D GYRQGMHEVLAP++  + ++   +         L G + A+    ++E DAF LF+A+M  ++ FYE G        PA  G+      +SP++E  KR+    L  ADPEL +HL  ++I PQ+ L+
Sbjct:  118 DVERCMPENL--YFREPNTQKMLLDILFIYCKLNRDIGYRQGMHEVLAPILWVVSRDAIDSQSLGPDHADLDGLTLASLDNRYVEHDAFTLFAAIMQTVKTFYEMG----SNNEPATAGLLN----NSPIVERSKRIHENYLHHADPELAEHLTAIEILPQIFLI 272          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A6A6RI33_9PLEO (RabGAP/TBC n=1 Tax=Massarina eburnea CBS 473.64 TaxID=1395130 RepID=A0A6A6RI33_9PLEO)

HSP 1 Score: 96.7 bits (239), Expect = 4.120e-20
Identity = 65/168 (38.69%), Postives = 90/168 (53.57%), Query Frame = 0
Query:    8 DLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADH---ETSLAGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            D+ER  P     +F  PA Q ++L VL +W  +H   GYRQGMHE+LAPL+  +E++ A  T+ + H   E +L    DA     ++E D+F LFSA+M   + FY           PA  G       D+P+I  C R+    L  ADPEL  HL +L+I PQ+ LL
Sbjct:  117 DIERCMPDNT--YFRQPATQNMMLDVLFVWCKMHPQIGYRQGMHEILAPLLWVVERD-AVDTKGSGHGEMEQTLVDLLDA----KYIEHDSFTLFSAIMQTAQTFYA----------PAETGPSM---KDTPMIARCSRIFERYLSRADPELAAHLTNLEIVPQIFLL 264          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A4P9XIN8_9FUNG (Rab-GTPase-TBC domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XIN8_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 6.510e-20
Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 0
Query:    5 IKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSL-AGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQV 169
            IK D++R +P     +F  PA Q+ +  +L ++  +H +  YRQGMHE+LAP++L +++E   A +  D +  L A +  AT     +E DAF LFSAVM   + +YE     ++  RPA GG        +P++ +  R+    L+E D +L  HL  L I PQ+
Sbjct:  105 IKQDVDRTFPDK--PYFRTPAAQERMTDILFVYCKIHHEVSYRQGMHELLAPILLVVDEESVDAAQCTDEKEPLVAAQIAATLDSRFVEHDAFVLFSAVMATAKQWYE----FTEEPRPARGGKMANS--STPILRISHRIHHELLKEIDQDLYNHLEELTIEPQI 262          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A7D8URE4_9HELO (TBC1 domain family member 5 n=1 Tax=Lachnellula cervina TaxID=1316786 RepID=A0A7D8URE4_9HELO)

HSP 1 Score: 95.5 bits (236), Expect = 1.060e-19
Identity = 61/173 (35.26%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    5 IKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPAP----SHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGG-GVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            I  D++R  P    E+F  P  Q++LL +L ++  ++ D GYRQGMHEVLAP++ A+E++        D + S   ESD         S++E DAF + S +M   + FYE G    D+R  A    +G  +   SP++E  K++    L   DPEL KHL  +++ PQ+ L+
Sbjct:  153 IYQDVQRCMPEV--EYFRRPETQRMLLDILFVFCKINQDVGYRQGMHEVLAPILWAVEEDAIEY----DSQNSAGSESDLIMKEILNRSYIEHDAFTILSLIMRSAKSFYELG--EPDKRSSASSTAIGTQQQGASPIVERSKQIHEVYLARLDPELAKHLTDIEVLPQIFLI 317          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A6A5VF93_9PLEO (RabGAP/TBC n=1 Tax=Bimuria novae-zelandiae CBS 107.79 TaxID=1447943 RepID=A0A6A5VF93_9PLEO)

HSP 1 Score: 95.1 bits (235), Expect = 1.420e-19
Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 0
Query:    8 DLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRA--ADHETSLAGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            D+ER  P     +F  PA Q ++L VL +W  +H + GYRQGMHE+LAPL+  +E++     R   A+ E +L    DA    S++E D F LFS +M     FY      S+ +             +SP++  C R+    L + DPEL  HL  L+I PQ+ LL
Sbjct:  117 DIERCMPDNV--YFRQPATQNMMLDVLFVWCKMHPNVGYRQGMHEILAPLLWVIERDAVDMARVDTAEVEQTLVDMLDA----SYMEHDTFTLFSLIMQTAMSFYVPADPASNFK-------------ESPMLARCARIFERYLPKTDPELASHLVKLEIVPQIFLL 264          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A8H3JAC5_9LECA (Rab-GAP TBC domain-containing protein n=1 Tax=Alectoria fallacina TaxID=1903189 RepID=A0A8H3JAC5_9LECA)

HSP 1 Score: 94.7 bits (234), Expect = 1.910e-19
Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = 0
Query:    8 DLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPAPSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            D+ER  P     +F  P  Q +LL +L ++  L+ D GYRQGMHEVLAP++  + ++   +         L G + A+    ++E DAF LF A+M  ++ FYE G        PA  G+      +SP++E  KR+    L  ADPEL +HL  ++I PQ+ L+
Sbjct:   73 DVERCMPENL--YFREPHTQNMLLDILFIYCKLNRDIGYRQGMHEVLAPVLWVVSRDAIDSQSLGPDHADLDGLTLASLDNRYVEHDAFTLFGAIMQTVKTFYEMG----SNNEPATTGLLN----NSPIVERSKRIHENYLHHADPELAEHLTAIEILPQIFLI 227          
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Match: A0A370TYK7_9HELO (Ypt of gyp1p n=1 Tax=Venustampulla echinocandica TaxID=2656787 RepID=A0A370TYK7_9HELO)

HSP 1 Score: 94.4 bits (233), Expect = 2.610e-19
Identity = 61/173 (35.26%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    5 IKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGMHEVLAPLVLALEKEVAAATRAADHETSLAGESDATPA----PSHLEADAFWLFSAVMTGLEGFYEHGGVVSDRRRPA-GGGVGGGRGVDSPVIEMCKRLQGPRLREADPELQKHLAHLDISPQVNLL 172
            I  D+ER  P    E+F  P  Q++LL +L ++  ++ D GYRQGMHEVLAP++  +E++   A  +  ++ S   ++D        P ++E DAF L S VM   + FYE G    DR+        G  +   SP++E  +R+    L   DPEL KHL  ++I PQ+ L+
Sbjct:   85 IYQDVERCMPDE--EYFRKPRTQRMLLDILFVFCKINQDVGYRQGMHEVLAPILWVVEQD---ALNSTSYDQSTESDADTLMKEVLDPVYIEHDAFTLLSLVMRSAKSFYELG--DPDRKSNIMSTATGTPQQAASPIVERSRRIHEVYLASLDPELAKHLTDIEILPQIFLI 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184815.4983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE6.260e-6154.15Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A194XLJ2_9HELO1.380e-2137.13RabGAP/TBC n=1 Tax=Mollisia scopiformis TaxID=1490... [more]
A0A8H4RWE6_9HELO6.510e-2137.36Rab-GAP TBC domain-containing protein n=1 Tax=Cudo... [more]
A0A8H6L6E1_9LECA1.200e-2036.36Rab-GAP TBC domain-containing protein n=2 Tax=Leth... [more]
A0A6A6RI33_9PLEO4.120e-2038.69RabGAP/TBC n=1 Tax=Massarina eburnea CBS 473.64 Ta... [more]
A0A4P9XIN8_9FUNG6.510e-2034.94Rab-GTPase-TBC domain-containing protein (Fragment... [more]
A0A7D8URE4_9HELO1.060e-1935.26TBC1 domain family member 5 n=1 Tax=Lachnellula ce... [more]
A0A6A5VF93_9PLEO1.420e-1935.93RabGAP/TBC n=1 Tax=Bimuria novae-zelandiae CBS 107... [more]
A0A8H3JAC5_9LECA1.910e-1935.76Rab-GAP TBC domain-containing protein n=1 Tax=Alec... [more]
A0A370TYK7_9HELO2.610e-1935.26Ypt of gyp1p n=1 Tax=Venustampulla echinocandica T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.270coord: 1..112
e-value: 1.0E-6
score: 30.4
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 5..169
NoneNo IPR availablePANTHERPTHR22957:SF337TBC1 DOMAIN FAMILY MEMBER 29-RELATEDcoord: 5..169
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 3..113
e-value: 1.0E-11
score: 44.9
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..172
score: 14.256
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 2..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184815contigH-elongata_contig184815:314..925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184815.4983.1mRNA_H-elongata_contig184815.4983.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184815 302..925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184815.4983.1 ID=prot_H-elongata_contig184815.4983.1|Name=mRNA_H-elongata_contig184815.4983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
MMDTIKADLERLYPTGCGEHFLAPARQKLLLSVLSLWADLHVDTGYRQGM
HEVLAPLVLALEKEVAAATRAADHETSLAGESDATPAPSHLEADAFWLFS
AVMTGLEGFYEHGGVVSDRRRPAGGGVGGGRGVDSPVIEMCKRLQGPRLR
EADPELQKHLAHLDISPQVNLL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf