prot_H-elongata_contig184784.4981.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184784.4981.1
Unique Nameprot_H-elongata_contig184784.4981.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig184784.4981.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 6.740e-16
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:    1 MYMFLFLLYWVWSMLALGASLRDASDMHHLYTSRLGISAVDMHTIEWSEV 50
            MYM LFL+YW WS+L+  +SLRDA+DMHHLYT+RL IS  D+HTIEWSEV
Sbjct:  106 MYMVLFLVYWAWSLLSFWSSLRDATDMHHLYTTRLRISRTDLHTIEWSEV 155
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BLAST of mRNA_H-elongata_contig184784.4981.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 6.740e-16
Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:    1 MYMFLFLLYWVWSMLALGASLRDASDMHHLYTSRLGISAVDMHTIEWSEV 50
            MYM LFL+YW WS+L+  +SLRDA+DMHHLYT+RL IS  D+HTIEWSEV
Sbjct:  115 MYMVLFLVYWAWSLLSFWSSLRDATDMHHLYTTRLRISRTDLHTIEWSEV 164
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184784.4981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9U8_9PHAE6.740e-1672.00Autophagy-related protein 9 n=1 Tax=Ectocarpus sp.... [more]
D7FZF2_ECTSI6.740e-1672.00Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007241Autophagy-related protein 9PFAMPF04109APG9coord: 2..50
e-value: 1.4E-8
score: 34.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.837

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184784contigH-elongata_contig184784:587..736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184784.4981.1mRNA_H-elongata_contig184784.4981.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184784 587..736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184784.4981.1 ID=prot_H-elongata_contig184784.4981.1|Name=mRNA_H-elongata_contig184784.4981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MYMFLFLLYWVWSMLALGASLRDASDMHHLYTSRLGISAVDMHTIEWSEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007241Autophagy-rel_prot_9