prot_H-elongata_contig184402.4973.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184402.4973.1
Unique Nameprot_H-elongata_contig184402.4973.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 2.420e-47
Identity = 84/164 (51.22%), Postives = 113/164 (68.90%), Query Frame = 0
Query:   13 RNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            R T+   +F GK+GI+ FT Q  AQ++SRNRAAGTM TK +E TKE +KR ++D V P IK  +P          R +++Q DN   H +N DP++ AA ++DGW IR++NQP+NSPDTNILDL FFN++Q LQDR TP+ VD  I  VK A+EE SP+  ++V
Sbjct:   80 RKTNRCCNFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWP------GGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKV 237          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.240e-45
Identity = 93/178 (52.25%), Postives = 119/178 (66.85%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFT----HQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M L AVARPR ++S N  FDGKIGIYPFT     Q  AQ++SRNRAAGT+VT+++E  + +YK  LI+ V+PDI+  FP   VS       V+ QQD+A  H V  DPE+ AA  + G  I ++NQPANSPD N+LDL FFNSIQ LQDR TP  +D L+  V+ A+   SP  ++RV
Sbjct:    1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPA--VST------VFAQQDSAPGHRVM-DPEIVAA-AAQGRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRV 168          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.910e-43
Identity = 85/172 (49.42%), Postives = 106/172 (61.63%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLN 174
            M L AVARPR N +TN  FDG+IG + FT  V AQ+SSRNR +GTMVT     T+++Y+ MLID VIP IK  +P    +       + LQQDNARPH+  +D  + AA  SDGW I ++ QP NSPD N+LDL FF +IQ LQ+R   K +D LI     AW       LN
Sbjct:  128 MFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAAR------ILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMNVLDLGFFRAIQTLQERTRCKTIDELIDATLSAWTTVDAMTLN 293          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A4Q9LLI7_9MICR (Uncharacterized protein (Fragment) n=1 Tax=Hamiltosporidium tvaerminnensis TaxID=1176355 RepID=A0A4Q9LLI7_9MICR)

HSP 1 Score: 156 bits (394), Expect = 6.060e-43
Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M + AVARPR +    + FDGKIGI+PF +Q  AQ++S+NRA GTM+TK +E  T    K M+ID VIP IK  FP      + + + +++QQDNA+PH  +ND ++ A   +D W I+   QPANSPD N+LDL FFNSIQ LQ   +P  +D LI  V+DA+ +     L+ V
Sbjct:  202 MFMAAVARPRYDAHRKNYFDGKIGIWPFVYQEPAQRNSKNRAKGTMITKNVESVTAVHCKNMIIDNVIPAIKSKFP-----PAYKKKTIYVQQDNAKPHFSDNDADIVALGSADDWNIKFKAQPANSPDLNVLDLGFFNSIQSLQHEASPHTIDELINCVQDAFHQLEANTLDNV 371          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI00053F3BA8 (uncharacterized protein LOC104908869 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3BA8)

HSP 1 Score: 155 bits (392), Expect = 7.800e-43
Identity = 84/175 (48.00%), Postives = 116/175 (66.29%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M  G ++RP   +   S +DGKIGIYPF  +V A++ S NR AGT+ TK I   TKE  ++ LI  VIP IK+ +P  P +     + +W+QQDNARPH+ + D +   A  SDG+ +R++NQPA SPD N+LDL FFN+IQ L+D+  PK VD LIKVV+ A++E  P + NR+
Sbjct:  149 MFEGVMSRPHITSEGVSIWDGKIGIYPFVDKVPAKRRSNNREAGTLETKPITSITKEVMRQKLIQSVIPAIKQKWP--PYAC----KDIWIQQDNARPHIDSTDADFIEAATSDGFNMRLVNQPAQSPDLNVLDLGFFNAIQSLKDQKAPKTVDKLIKVVQAAYDEYDPKLGNRI 317          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI000B8B3B8C (uncharacterized protein LOC110793906 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B3B8C)

HSP 1 Score: 158 bits (400), Expect = 1.820e-42
Identity = 80/175 (45.71%), Postives = 119/175 (68.00%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIE-FTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M +G+VARP+ N      FDGKIGI+PFT Q+ A++ S+NRA GT+ TK ++  TKE  ++ LID+V+P I++ +PR  VS +     VW+QQDNA+PH+  +D +   A   DG  IR++NQP  SPD N+LDL FF +IQ L++++ P+N+D L++  +DA+    P  LNR+
Sbjct:  337 MFIGSVARPQFNEIGEVLFDGKIGIFPFTEQIPAKRRSKNRARGTLETKVVQSITKEVIRQKLIDKVLPAIRQKWPRH-VSTT-----VWIQQDNAKPHITGDDIQFMQAATQDGLDIRLINQPPQSPDLNVLDLGFFRAIQALKEQVMPRNIDQLVEAFEDAFNGYDPRFLNRI 505          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.130e-41
Identity = 81/172 (47.09%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLN 174
            M L AVARPR N  T   FDGKIG + FT +V A ++SRNR AGT+ T+ +  T+  YK MLID+VIP IK  +P      S   R V +QQDNARPH+  +D  +  A  S GW ++++ QP NSPD NILDL FF +IQ LQ++   +N+D++I     AW ++  + LN
Sbjct:  218 MFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWP------SSAGRNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLN 383          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: W4HAZ6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAZ6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.330e-41
Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLN 174
            M L AVARPR +   ++  DGKIG + FT QV   ++SRNR AGT+ TK +  T++ Y+ MLID VIP IK  +P        E R + +QQDNARPH+   D  +  A  SDGW + +  QP NSPD N+LDL FF +IQ LQ++   +NVD+++    +AW++  P  LN
Sbjct:    2 MFLSAVARPRWDNEKSALVDGKIGTWHFTEQVPVIRASRNRPAGTLETKPVSVTRDMYRAMLIDHVIPAIKAKWP------VGESRRIIIQQDNARPHVPPLDSRIVDACTSDGWMMELKYQPPNSPDLNVLDLGFFRAIQSLQEKNYSRNVDDIVAASDEAWKQVEPMTLN 167          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC)

HSP 1 Score: 147 bits (370), Expect = 1.050e-40
Identity = 81/175 (46.29%), Postives = 114/175 (65.14%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTI-EFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M L  VARPR +++ N +F GKIGI+PFT Q  AQ++S+NR AGTM TK I   TK+  +  LI++V+P I+  +PR   S++ E   +++QQDNARPH+  ND E       DG+ IR+  QP NSPD N+LDL +F +IQ LQ R  P  +D L++ V++++E  S   LN V
Sbjct:   31 MFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWPR---SSNMEP--IFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPNSPDFNVLDLGYFRAIQSLQYRYAPSTIDELVQAVQESFENLSSKNLNYV 200          
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Match: UPI000B8B8A8D (uncharacterized protein LOC110797992 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B8A8D)

HSP 1 Score: 146 bits (368), Expect = 5.250e-40
Identity = 77/175 (44.00%), Postives = 106/175 (60.57%), Query Frame = 0
Query:    3 MLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVTKTIEFTKESYKR-MLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPHLVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMTPKNVDNLIKVVKDAWEEDSPTVLNRV 176
            M  G VARPR N   +  FDGKIGI+ FT+Q  A++SS+N   GTM TK +EF  +   R MLI+ ++P IK  +PR         +I+++QQDNA+ H+   DPE       +G+   +LNQP NSPD NILDL FF SIQ    +  PK+VD +++ V +A+ E  P  L+ V
Sbjct:   44 MFTGIVARPRFNEQADCTFDGKIGIFTFTYQAEAKRSSKNILKGTMETKIVEFVNQKVTRPMLINEIVPTIKAKWPR-----DGRHKIIFIQQDNAKAHISQEDPECQQVYQQEGFTFILLNQPPNSPDLNILDLRFFKSIQLFMHKKMPKDVDKMMEAVNEAFYELEPITLSHV 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184402.4973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGY9_9PHAE2.420e-4751.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ6_9PHAE1.240e-4552.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GP40_9STRA1.910e-4349.42Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A4Q9LLI7_9MICR6.060e-4346.86Uncharacterized protein (Fragment) n=1 Tax=Hamilto... [more]
UPI00053F3BA87.800e-4348.00uncharacterized protein LOC104908869 n=1 Tax=Beta ... [more]
UPI000B8B3B8C1.820e-4245.71uncharacterized protein LOC110793906 n=1 Tax=Spina... [more]
A0A6A4YXI9_9STRA1.130e-4147.09Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4HAZ6_9STRA4.330e-4145.35Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI000E6FC7BC1.050e-4046.29uncharacterized protein LOC113359119 n=1 Tax=Papav... [more]
UPI000B8B8A8D5.250e-4044.00uncharacterized protein LOC110797992 n=1 Tax=Spina... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.470coord: 38..176
e-value: 5.4E-11
score: 44.4
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 3..175
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 3..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184402contigH-elongata_contig184402:303..833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184402.4973.1mRNA_H-elongata_contig184402.4973.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184402 171..1226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184402.4973.1 ID=prot_H-elongata_contig184402.4973.1|Name=mRNA_H-elongata_contig184402.4973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
MAMLLGAVARPRRNTSTNSDFDGKIGIYPFTHQVRAQQSSRNRAAGTMVT
KTIEFTKESYKRMLIDRVIPDIKRVFPRPPVSASPEDRIVWLQQDNARPH
LVNNDPELTAALLSDGWGIRMLNQPANSPDTNILDLEFFNSIQPLQDRMT
PKNVDNLIKVVKDAWEEDSPTVLNRV*
back to top