prot_H-elongata_contig18428.4968.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18428.4968.1
Unique Nameprot_H-elongata_contig18428.4968.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.220e-28
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDF 89
            MM ELGF K F  +P+Y DNT+TLH  GN ++S R KHIALR+FF++ELV EG I+IHYV T+D LAD+GTKH  KHR   L+ L+N+F
Sbjct: 1576 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.280e-28
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDF 89
            MM ELGF K F  +P+Y DNT+TLH  GN ++S R KHIALR+FF++ELV EG I+IHY  T+D LA +GTKH  KHR   L+  +N+F
Sbjct:  122 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 2.490e-28
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDF 89
            MM ELGF K F  +P+Y DNT+TLH  GN ++S R KHIALR+FF++ELV EG I+IHY  T+D LAD+GTKH  KHR   L+ L+N+F
Sbjct:  347 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.060e-28
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDF 89
            MM ELGF K F  +P+Y DNT+TLH  GN ++S R KHIALR+FF++ELV EG I+IHYV T+D LAD+GTKH   HR   L+ L+N+F
Sbjct:  907 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 8.790e-27
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMND 88
            MM ELG  K F  +P+Y DNT+TLH  GN ++S R KHIALR+FF++ELV EG I+IHYV T+D LAD+GTKH  KHR   L+ L+N+
Sbjct:  568 MMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINN 655          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 4.420e-26
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALI 83
            MM ELGF   F S PLY+ NT+TLH+ GN T+S R KH+ALR+F+++E+V+EG I+IHY+ T+D LAD+GTKHL K RH  LI
Sbjct:  601 MMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLI 682          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.530e-24
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMN 87
            ++ ELG  K F  VPLY DNT+TLH  GN ++S R KHIALR+F+++EL+ EG I+IHY+ T   +AD+GTKHL KHR   L+ +++
Sbjct: 1077 ILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHRLKHLLDIIS 1163          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.740e-24
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDFKA 91
            ++ ELGF K F  VPLY DNT+TLH  GN ++S R KHIALR+FF+++LV EG I IH+V T    AD+GTKHL K R   L+ ++ +F  
Sbjct:  265 ILTELGFGKEFAQVPLYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTKHLNKDRFQHLLNMIKNFNV 355          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.640e-24
Identity = 45/89 (50.56%), Postives = 69/89 (77.53%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDF 89
            MM ELGF   F+S PL++D+T+TL++ GN T+S   KH+ALR+F+++++V+EG I+IHY+ T+D LAD+GT++L K RH  LI  + +F
Sbjct:  688 MMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Match: A0A6H5KC00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC00_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 6.440e-24
Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 0
Query:    1 MMVELGFEKGFNSVPLYLDNTSTLHIAGNHT-YSPRVKHIALRYFFVQELVEEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDFKA 91
            ++ ELGF K F  VPLY DNT+TLH  GN + +S R KHIALR+F+++ELV EG I+IHY+ T    AD+GTKHL KHR   L+ +++ F  
Sbjct:  888 ILTELGFGKEFAQVPLYCDNTATLHALGNRSSFSSRTKHIALRFFYIRELVSEGRISIHYIPTDSNPADIGTKHLNKHRLKHLLDIISSFNV 979          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18428.4968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJH6_9PHAE1.220e-2860.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMK0_9PHAE2.280e-2857.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE2.490e-2859.55Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE3.060e-2859.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE8.790e-2759.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBU1_9PHAE4.420e-2660.24CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K129_9PHAE2.530e-2452.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N2_9PHAE2.740e-2452.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R7_9PHAE4.640e-2450.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KC00_9PHAE6.440e-2453.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18428contigH-elongata_contig18428:5049..5324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18428.4968.1mRNA_H-elongata_contig18428.4968.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18428 5049..5336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18428.4968.1 ID=prot_H-elongata_contig18428.4968.1|Name=mRNA_H-elongata_contig18428.4968.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MMVELGFEKGFNSVPLYLDNTSTLHIAGNHTYSPRVKHIALRYFFVQELV
EEGMITIHYVNTQDQLADLGTKHLGKHRHLALIKLMNDFKA*
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