prot_H-elongata_contig18393.4955.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18393.4955.1
Unique Nameprot_H-elongata_contig18393.4955.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
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BLAST of mRNA_H-elongata_contig18393.4955.1 vs. uniprot
Match: A0A6H5JQW8_9PHAE (DUF2470 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQW8_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 4.430e-62
Identity = 99/173 (57.23%), Postives = 131/173 (75.72%), Query Frame = 0 
Query:    1 MIESVDNIDNVHVAELDRDHMELEVVYCDQGESTCVAVAVPISFPRHCHDEECIIGVIHDLREKEDVQVNSSEVRLPKKKISAELMETIARICVVMNRDFQDELASFVQAFGNKGSDRPTGACEMSELTPDGFIVTSALFPEESVTIASPKECLSASDFQEQILALSEQAISI 173
            +IESV+ +D + + ELD DHM+L+VVYCDQGE TCVAVAVP+ FP HC+D +C+IGVIH+L + E+V+   +   +P K +S EL+ TIARIC VMNRDFQDEL +FV+AFG   +D   G CEM  L+PDGF+V S   P++ V+IA  KEC SA DFQ+QIL +SE+A++I
Sbjct:  139 LIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELEQAENVEPRPAMANVPPKYVSPELIGTIARICAVMNRDFQDELRNFVRAFGGPVADEMVGNCEMLSLSPDGFMVRSDANPDKPVSIAFSKECQSALDFQKQILLVSERAMAI 311
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18393.4955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQW8_9PHAE4.430e-6257.23DUF2470 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037119Haem oxygenase HugZ-like superfamilyGENE3D3.20.180.10coord: 87..171
e-value: 5.5E-5
score: 25.1
IPR019595Domain of unknown function DUF2470PFAMPF10615DUF2470coord: 90..164
e-value: 1.7E-4
score: 22.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18393contigH-elongata_contig18393:2880..7035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18393.4955.1mRNA_H-elongata_contig18393.4955.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18393 1416..7071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18393.4955.1 ID=prot_H-elongata_contig18393.4955.1|Name=mRNA_H-elongata_contig18393.4955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MIESVDNIDNVHVAELDRDHMELEVVYCDQGESTCVAVAVPISFPRHCHD
EECIIGVIHDLREKEDVQVNSSEVRLPKKKISAELMETIARICVVMNRDF
QDELASFVQAFGNKGSDRPTGACEMSELTPDGFIVTSALFPEESVTIASP
KECLSASDFQEQILALSEQAISIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037119Haem_oxidase_HugZ-like_sf
IPR019595DUF2470