prot_H-elongata_contig183920.4953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig183920.4953.1
Unique Nameprot_H-elongata_contig183920.4953.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A6H5JFZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFZ3_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 7.310e-27
Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    9 ASLEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            A +E  LRSLV+YYL+ +MH+NA FL ERLVACNPREENVLLLATCH    S+L AHALLQGCR+PESR
Sbjct:   14 AEMEDSLRSLVQYYLENLMHANATFLGERLVACNPREENVLLLATCHLMNKSKLTAHALLQGCRLPESR 82          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: D7FXT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT1_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 7.180e-25
Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    9 ASLEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            A +E  LRSLV+YYL+ +MH+NA FL ERLVACNPREENVLLLATCH    S+L AHALLQGCR+PESR
Sbjct:   14 AEMEDSLRSLVQYYLENLMHANATFLGERLVACNPREENVLLLATCHVMNKSKLTAHALLQGCRLPESR 82          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A835YV22_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV22_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.140e-12
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHF--GESSELRAHALLQGCRMPESR 77
            +EA LR+LV +YLD  +  NA FLCERL+A +P E+N  LLATCH   G+S + RAH LLQG R    R
Sbjct:    1 MEAQLRALVCHYLDSYLLENATFLCERLLAAHPGEDNAFLLATCHARQGDSGKRRAHVLLQGTRSEPCR 69          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A0N7L7V2_PLAHL (DNA-binding cell division cycle control protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7V2_PLAHL)

HSP 1 Score: 62.0 bits (149), Expect = 2.020e-9
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    9 ASLEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            +++E  L   ++ YLD  ++ NA FL ERLVA NP EEN+LLLATC+F +    +A A+L G    ++R
Sbjct:    3 SAVEVALIKQIQRYLDTFVYDNARFLAERLVAHNPNEENLLLLATCYFRKGQAAQAAAVLNGATSADNR 71          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A061R3K8_9CHLO (Anaphase-promoting complex subunit 3 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R3K8_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 2.020e-9
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPES 76
            +EA L S ++Y L+  ++ NA+FLCERLVA  P+EEN LLLATC++      RA+ LL+    P+S
Sbjct:    1 MEAQLVSAIQYSLNLHLYQNALFLCERLVAGFPKEENFLLLATCYYHSKQIHRAYHLLKNSANPQS 66          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A2P5FST6_TREOI (N-terminal acetyltransferase A, auxiliary subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FST6_TREOI)

HSP 1 Score: 56.6 bits (135), Expect = 1.610e-7
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            +EA L   V++ L   MHSNAIF+CERL A  P E N+ LLA+C+   +    A+ +L+G ++ +SR
Sbjct:    1 MEAILTDCVQHSLRDFMHSNAIFICERLCAEFPSETNLQLLASCYLRNNQAYSAYHILKGTQLAQSR 67          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A078GZZ9_BRANA (BnaC05g37040D protein n=10 Tax=Brassica TaxID=3705 RepID=A0A078GZZ9_BRANA)

HSP 1 Score: 55.5 bits (132), Expect = 4.100e-7
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            +E  L + V   L   M SNAIFLCERL+A  P E N+ LLA C+   S    A+ +L+G + P+SR
Sbjct:    1 METLLANCVEKNLTQFMFSNAIFLCERLLAQFPSEVNLQLLARCYLSNSQPYSAYYILKGSKTPQSR 67          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: V4LCX4_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LCX4_EUTSA)

HSP 1 Score: 54.3 bits (129), Expect = 1.050e-6
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            +E  L + V   L   M +NAIFLCERL+A  P E N+ LLA C+   S    A+ +L+G +MP+SR
Sbjct:    1 MENLLVNCVERNLSQFMLTNAIFLCERLLAEFPSEVNLQLLARCYLSNSQAYSAYYILKGSKMPQSR 67          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A6J0NY14_RAPSA (cell division cycle protein 27 homolog A isoform X1 n=3 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NY14_RAPSA)

HSP 1 Score: 53.1 bits (126), Expect = 2.680e-6
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   11 LEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            +E+ L + V   L   M SNAIFLCERL+A  P E N+ LLA C+        A+ +L+G + P+SR
Sbjct:    1 MESLLVNSVEKNLTQFMFSNAIFLCERLLADFPSEVNLQLLARCYLSNGQPYSAYYILKGSKTPQSR 67          
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Match: A0A6D2LDA2_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2LDA2_9BRAS)

HSP 1 Score: 53.1 bits (126), Expect = 2.700e-6
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    5 VENTASLEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLLLATCHFGESSELRAHALLQGCRMPESR 77
            V     +E  L + V   L   M +NAIFLCERL+A  P E N+ LLA C+   S    A+ +L+G + P+SR
Sbjct:  103 VVTIRDMETLLVNCVEKNLSQFMLTNAIFLCERLLAEFPSEVNLQLLARCYLSNSQAYSAYYILKGSKTPQSR 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183920.4953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JFZ3_9PHAE7.310e-2773.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXT1_ECTSI7.180e-2573.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV22_9STRA1.140e-1255.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0N7L7V2_PLAHL2.020e-944.93DNA-binding cell division cycle control protein n=... [more]
A0A061R3K8_9CHLO2.020e-948.48Anaphase-promoting complex subunit 3 n=1 Tax=Tetra... [more]
A0A2P5FST6_TREOI1.610e-743.28N-terminal acetyltransferase A, auxiliary subunit ... [more]
A0A078GZZ9_BRANA4.100e-744.78BnaC05g37040D protein n=10 Tax=Brassica TaxID=3705... [more]
V4LCX4_EUTSA1.050e-644.78Uncharacterized protein n=1 Tax=Eutrema salsugineu... [more]
A0A6J0NY14_RAPSA2.680e-643.28cell division cycle protein 27 homolog A isoform X... [more]
A0A6D2LDA2_9BRAS2.700e-641.10Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12895ANAPC3coord: 26..71
e-value: 2.9E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR12558:SF27CELL DIVISION CYCLE PROTEIN 27 HOMOLOG Acoord: 8..77
NoneNo IPR availablePANTHERPTHR12558CELL DIVISION CYCLE 16,23,27coord: 8..77
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 3..76
e-value: 2.5E-14
score: 54.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig183920contigH-elongata_contig183920:881..1114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig183920.4953.1mRNA_H-elongata_contig183920.4953.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig183920 881..1114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig183920.4953.1 ID=prot_H-elongata_contig183920.4953.1|Name=mRNA_H-elongata_contig183920.4953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MPPDVENTASLEACLRSLVRYYLDCMMHSNAIFLCERLVACNPREENVLL
LATCHFGESSELRAHALLQGCRMPESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf