prot_H-elongata_contig18374.4943.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18374.4943.1
Unique Nameprot_H-elongata_contig18374.4943.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length182
Homology
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BLAST of mRNA_H-elongata_contig18374.4943.1 vs. uniprot
Match: D7G264_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G264_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.690e-11
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0 
Query:    5 GHGLLR-EKVSSPPPLALLDEITDGSQAAHSFMWEQSFMSAQPNPISQPPTLTVMSPMYNENVAV 68
            GHGLL  +         +L +  D  QAAHS MWEQSFMSAQPNPI +P TLTV+  MYNE+VA+
Sbjct:  853 GHGLLEGDGGQGAAHDTMLSQTHDDDQAAHSVMWEQSFMSAQPNPIMEPTTLTVLQDMYNEDVAI 917
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18374.4943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G264_ECTSI1.690e-1156.92Non-specific serine/threonine protein kinase n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18374contigH-elongata_contig18374:1965..5131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18374.4943.1mRNA_H-elongata_contig18374.4943.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18374 1965..5131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18374.4943.1 ID=prot_H-elongata_contig18374.4943.1|Name=mRNA_H-elongata_contig18374.4943.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
VVEEGHGLLREKVSSPPPLALLDEITDGSQAAHSFMWEQSFMSAQPNPIS
QPPTLTVMSPMYNENVAVRGRTTVEPTPPDAGACAHAEAKHGSVPVRDSR
LGDSLLDGAYGGSGSVVAGDDRLHSGRLCFPRPRHYALVAVIPHLAGALA
HEDAEARHGRSADGYSAVDGTWPDRRNAVAA*
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