prot_H-elongata_contig183627.4939.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig183627.4939.1
Unique Nameprot_H-elongata_contig183627.4939.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: D7FUS3_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.750e-29
Identity = 58/89 (65.17%), Postives = 71/89 (79.78%), Query Frame = 0
Query:    1 QQLAEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGARTVEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPD 88
            + LAEADA AF E SDG+ A+V+ PS   +RLW+ + PWRLYEGLG+RTVEALGLDP KGV VMLT DQ+YT S+  P V+W+RQVAP+
Sbjct:  109 KDLAEADAGAFVEESDGMFARVETPSTHLVRLWIGVKPWRLYEGLGSRTVEALGLDPLKGVMVMLTTDQYYTLSNKCPGVRWLRQVAPE 197          
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: A0A6H5JHW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW3_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.110e-27
Identity = 59/95 (62.11%), Postives = 67/95 (70.53%), Query Frame = 0
Query:    1 QQLAEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGARTVEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDAANGNM 94
            + LA  DA A  E  DG+AA+V A S   LRLWV + PWRLY  L +RTVEALGLDP KGV VMLT DQHYT S+ RP VKW+RQV PD   G+M
Sbjct:    9 KDLANGDALAINEGLDGVAARVQARSTYQLRLWVVVQPWRLYNHLSSRTVEALGLDPMKGVMVMLTTDQHYTLSTVRPEVKWLRQVHPDKVEGSM 103          
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: D7G896_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G896_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.280e-13
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    4 AEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGART-VEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDAAN 91
            A ADA+ F +  DGI A+V   S +   LWV I P RL EG    T VE +GLDP+KGV VMLT D  YT SS  P+V W RQVA  A N
Sbjct:   89 AHADADEFIDGVDGITARVQLSS-VLTNLWVYIDPRRLSEGRALGTSVETVGLDPSKGVVVMLTTDYGYTSSSKCPKVLWARQVARAAMN 177          
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: A0A6H5J7F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.960e-13
Identity = 47/88 (53.41%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    4 AEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGART-VEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDA 89
            A+ADA+ F +  DGI A+V   S +   LWV I P RL EG    T VE +GLDP KGV VMLT D  YT SS  P+V W RQVA  A
Sbjct:   91 AQADADEFIDGVDGITARVQLSSAL-TNLWVYIDPRRLSEGRAPGTRVETVGLDPRKGVVVMLTTDHDYTSSSKCPKVLWARQVARTA 177          
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: A0A6H5JA28_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA28_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.160e-13
Identity = 44/88 (50.00%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    4 AEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGART-VEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDA 89
            AE DA+ F +  DGI+A+V   SP    +WV + P RL EG  + T V+ +GLDP+KGV VMLT    Y  S   P+VKW RQVAP A
Sbjct:   92 AEVDADEFIDGVDGISARVHL-SPALTNIWVYVGPRRLSEGRASGTCVKTVGLDPSKGVLVMLTTPHDYISSGEFPQVKWARQVAPAA 178          
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Match: D7FUS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS6_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 9.710e-13
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    4 AEADAEAF-EPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGART-VEALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDA 89
            AE DA+ F +  DGI+A V   SP    +WV + P RL EG    T V+ +GLDP+KGV VMLT    Y  S   P+VKW RQVAP A
Sbjct:   92 AEVDADEFIDGVDGISASVQL-SPTLTNVWVYVDPRRLSEGRAPGTCVKTVGLDPSKGVVVMLTTPHDYMSSGKIPQVKWARQVAPTA 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183627.4939.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FUS3_ECTSI3.750e-2965.17PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JHW3_9PHAE1.110e-2762.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G896_ECTSI1.280e-1353.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7F0_9PHAE2.960e-1353.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA28_9PHAE6.160e-1350.00PARP catalytic domain-containing protein n=1 Tax=E... [more]
D7FUS6_ECTSI9.710e-1350.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig183627contigH-elongata_contig183627:44..1070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig183627.4939.1mRNA_H-elongata_contig183627.4939.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig183627 44..1070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig183627.4939.1 ID=prot_H-elongata_contig183627.4939.1|Name=mRNA_H-elongata_contig183627.4939.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
QQLAEADAEAFEPSDGIAAKVDAPSPIFLRLWVSILPWRLYEGLGARTVE
ALGLDPTKGVQVMLTADQHYTKSSARPRVKWVRQVAPDAANGNM
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