prot_H-elongata_contig18341.4933.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18341.4933.1
Unique Nameprot_H-elongata_contig18341.4933.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length192
Homology
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A6H5JMD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD8_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.020e-101
Identity = 148/191 (77.49%), Postives = 170/191 (89.01%), Query Frame = 0
Query:    1 KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA 191
            KVGLLGG D D  +PCD + LE +K K CFVSE+++ DN+KMELS+SKPYTLPDGT ++LGRERYRAAELLFDPA + REE +SL +TVLD+IL+C+RKTW ILAQTVILTGGTTE+ GLNRRLQRELTKASRA+G+RLK+TVM PEDDHNNTVW+GGSML S GALDGLWFTRAEYEEYGAG IH+KFAA
Sbjct:  205 KVGLLGGDDFDPDDPCDVMKLEALKAKVCFVSEDVDKDNAKMELSMSKPYTLPDGTRVTLGRERYRAAELLFDPAMSLREE-ESLPNTVLDSILSCDRKTWPILAQTVILTGGTTEMPGLNRRLQRELTKASRANGVRLKYTVMGPEDDHNNTVWIGGSMLVSAGALDGLWFTRAEYEEYGAGYIHSKFAA 394          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D8LK63_ECTSI (Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK63_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 3.480e-98
Identity = 147/191 (76.96%), Postives = 172/191 (90.05%), Query Frame = 0
Query:    1 KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA 191
            KVGL+GG + +  +PCD + LE +K K CFVSE+++ DN+KMELS+SKPYTLPDGT ++LGRERYRAAELLFDPA + REE DSLQ+TVLD+IL+C+RKTW +LAQTVILTGGTTE+ GLNRRLQRELTKASRA+G+RLK+TVM PEDDHNNTVW+GGSMLAS GALDGLWFTRAEYEEYGAG IH+KFAA
Sbjct:  528 KVGLMGGDEFEPDDPCDVMELEALKAKVCFVSEDVDKDNAKMELSMSKPYTLPDGTRVTLGRERYRAAELLFDPAMSLREE-DSLQNTVLDSILSCDRKTWPVLAQTVILTGGTTEMHGLNRRLQRELTKASRANGVRLKYTVMAPEDDHNNTVWIGGSMLASAGALDGLWFTRAEYEEYGAGYIHSKFAA 717          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A0F7RNL9_GONPE (Actin-like protein n=2 Tax=Gonium pectorale TaxID=33097 RepID=A0A0F7RNL9_GONPE)

HSP 1 Score: 121 bits (303), Expect = 1.900e-29
Identity = 71/188 (37.77%), Postives = 103/188 (54.79%), Query Frame = 0
Query:    4 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENI--ETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASR-ASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            LL    + L+N  +   +  VK K  FV+ +   E  +++    + K YTLPDG  IS+G ER+R AE+LFDP     E G  + + ++D++LAC+      L   V+L+GGTT L G+  RL +ELT A+  A  +R+     V   +    VW+GGS+LAS       W TR EY+EYG   +H K
Sbjct:  196 LLTEAGVKLTNSAELEIVRDVKEKLGFVALDFAAELGSARSSSLLHKEYTLPDGNCISIGEERFRCAEVLFDPRPLGHESGGGIANLLMDSVLACDIDVRRELLHNVVLSGGTTMLQGIAARLTKELTAAAPPACPVRV-----VAPPERKFLVWIGGSVLASLATFANQWITREEYDEYGPTVVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: O24426_CHLRE (Actin-like protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=O24426_CHLRE)

HSP 1 Score: 118 bits (296), Expect = 1.960e-28
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 0
Query:   12 LSNPCDALTLEGVKTKTCFVSENIETDNSKMELS--ISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTK-ASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            L+N  +   +  +K +  +V+ + +T+ +    S  +SK YTLPDG +I++G ER+R AELLFDP+    E+G+ +   + DA+ AC+      L   V+L+GGTT   G+  RL +ELT  A  A  +R+     V   +    VW+GGS+LAS  +    W T  EY EYG G +H K
Sbjct:  204 LTNSAEMEIVRDIKERLSYVALDYDTELATARSSSVVSKDYTLPDGQSIAVGEERFRCAELLFDPSPLGHEKGEGIHTMLHDAVSACDIDVRKELLYNVVLSGGTTMTQGIAARLHKELTALAPSACTVRV-----VAPPERKFLVWIGGSVLASLASFASQWVTAEEYNEYGPGIVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A8J4DE75_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4DE75_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 2.020e-27
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 0
Query:   24 VKTKTCFVSENIETDNSKMELS--ISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTK-ASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            +K +  +V+++ E++      S  + K Y LPDGT IS+G ER+R AE+LFDP    RE+G  +   ++D+I AC+      L   ++L+GGTT + G+  RL +E+T  A   S +R+   V  PE  +   VW+GGS+LAS  +    W TR EY+EYG   IH K
Sbjct:  216 IKERLAYVAQDFESELCVARSSSVMDKNYQLPDGTLISVGEERFRCAEVLFDPTPLGREQGGGVHKMMMDSINACDIDVRKDLLHNLVLSGGTTLVEGIAARLSKEVTAMAPPGSAVRV---VAPPERKY--LVWIGGSVLASLASFSSQWVTRDEYDEYGPSIIHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A0B1S619_OESDE (Actin n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1S619_OESDE)

HSP 1 Score: 110 bits (276), Expect = 1.640e-26
Identity = 59/167 (35.33%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   24 VKTKTCFVSENIETD--NSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            +K K C+V+ + E +   S    SI K Y LPDG  I++G ER+RA E+LF P    +E    + +   ++I++C+      L   ++L+GG+T   G+  R+++ELT  + ++   +K  +M P +    +VW+GGS+LAS      +W T+AEY+EYGA  +H K
Sbjct:   92 IKEKLCYVAFDYEQEMIESVDSTSIDKNYELPDGQEITIGSERFRAPEVLFQPHVLGKESS-GIHENCYNSIMSCDIDIRKDLYMNIVLSGGSTMFPGITDRMKKELTTLAPST---VKVKIMAPPE-RKYSVWIGGSVLASLSTFQMMWITKAEYDEYGAAIVHRK 253          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: UPI001E8E345A (actin beta/gamma 1 n=1 Tax=Lentinula edodes TaxID=5353 RepID=UPI001E8E345A)

HSP 1 Score: 110 bits (275), Expect = 1.650e-26
Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = 0
Query:   24 VKTKTCFVSENIETD--NSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            +K + C+V+ + E +   +    ++ K Y LPDG  I++G ER+RA E LF P     E    + +TV D+I  C+      L   ++L+GGTT   GL  R+Q+E+T  + AS   +K  ++ P +    +VW+GGS+LAS      LW ++ EY+E G G +H K
Sbjct:   77 IKERLCYVALDFEQELQTAARSSALEKNYELPDGQVITIGNERFRAPEALFQPHMVGLE-ASGIHETVYDSIFKCDLDVRRELYSNIVLSGGTTMFPGLADRMQKEITSLAPAS---MKVKIVAPPE-RKYSVWIGGSILASLSTFQNLWISKQEYDESGPGIVHRK 238          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D8TK19_VOLCA (Actin-like protein n=2 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TK19_VOLCA)

HSP 1 Score: 113 bits (282), Expect = 2.060e-26
Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    4 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDN--SKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            +L    + L N  +   +  +K +  +V+ + E++   ++    + K Y LPDGTTIS+G ER+R +E+LFDP+    E+G  +   + D+I AC+      L + ++L+GGTT + G+  RL +E+T  +  S       V+ P +     VW+GGS+LAS  +    W TR EY+EYG   +H K
Sbjct:  196 MLTESGVKLINTAEMEIVRDIKERLAYVALDFESELRVARSNSVMCKDYQLPDGTTISVGEERFRCSEVLFDPSPLGLEQGSGIHKMLTDSINACDIDVRKNLLENLVLSGGTTMVEGIAARLTKEVTAMAPPSAT---VRVVAPPE-RKFLVWIGGSVLASLASFSSKWVTRDEYDEYGPSIVHRK 378          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: D5MRC0_9EUKA (Actin (Fragment) n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=D5MRC0_9EUKA)

HSP 1 Score: 111 bits (277), Expect = 2.280e-26
Identity = 60/185 (32.43%), Postives = 100/185 (54.05%), Query Frame = 0
Query:    4 LLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            LL  +    +   +   +  +K K C+V+ + + + +K +  + K Y LPDG  I++G ER+R  E LFDP+    E    + +T   +I+ C+      L   V+L+GGTT   G+  R+Q+E+T  +  S +R+K  V  PE  ++  VW+GGS+L+S  +   +W T+ EY E G   +H K
Sbjct:  106 LLTERGYSFNTSAEREIVRDIKEKLCYVANDADAEMAKQDSELEKDYMLPDGRMITVGNERFRCPEALFDPSVLGME-ARGIHETTYKSIMGCDMDIRKDLYSNVVLSGGTTMYPGMAERMQKEITSLA-PSAMRVKI-VAPPERKYS--VWIGGSILSSLSSFQTMWITKEEYMENGPSIVHKK 285          
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Match: A0A250XJ58_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJ58_9CHLO)

HSP 1 Score: 109 bits (272), Expect = 2.880e-26
Identity = 63/174 (36.21%), Postives = 97/174 (55.75%), Query Frame = 0
Query:   24 VKTKTCFVSENIETDNSKMELSISKPYTLPDGTTISLGRERYRAAELLFDPATASREEG---------DSLQDTVLDAILACERKTWAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDHNNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAK 188
            +K   C VS+ +  D+    +  +  Y LPDG  I +G +R++A ELLF P+  S   G          SLQ  VLD+I +C+      L  +V+LTGGT+ L+GL  RL++EL  A      ++K ++ +   +   +VW+GGS+L+S G+   +W ++ EYEE GA  IH K
Sbjct:   47 IKESICRVSDQLFDDSVNSNIP-TVSYELPDGQEIHVGTDRFKAPELLFQPSLLSSYPGVKLTGKGTPASLQSLVLDSIASCDVDVRKELYASVVLTGGTSLLSGLRDRLEKELVVAG-PQAAKIKVSMPINTQERRFSVWIGGSILSSLGSFQQMWMSKKEYEEAGASLIHRK 218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18341.4933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMD8_9PHAE3.020e-10177.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK63_ECTSI3.480e-9876.96Actin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A0F7RNL9_GONPE1.900e-2937.77Actin-like protein n=2 Tax=Gonium pectorale TaxID=... [more]
O24426_CHLRE1.960e-2837.22Actin-like protein n=3 Tax=Chlamydomonas TaxID=305... [more]
A0A8J4DE75_9CHLO2.020e-2739.29Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
A0A0B1S619_OESDE1.640e-2635.33Actin n=1 Tax=Oesophagostomum dentatum TaxID=61180... [more]
UPI001E8E345A1.650e-2635.33actin beta/gamma 1 n=1 Tax=Lentinula edodes TaxID=... [more]
D8TK19_VOLCA2.060e-2633.69Actin-like protein n=2 Tax=Volvox carteri f. nagar... [more]
D5MRC0_9EUKA2.280e-2632.43Actin (Fragment) n=2 Tax=Palpitomonas bilix TaxID=... [more]
A0A250XJ58_9CHLO2.880e-2636.21Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familySMARTSM00268actin_3coord: 1..190
e-value: 0.0095
score: -137.2
IPR004000Actin familyPFAMPF00022Actincoord: 14..189
e-value: 2.9E-43
score: 148.0
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 21..182
NoneNo IPR availableGENE3D3.90.640.10coord: 8..81
e-value: 3.9E-44
score: 152.8
NoneNo IPR availableGENE3D3.30.420.40coord: 154..182
e-value: 3.9E-44
score: 152.8
NoneNo IPR availableGENE3D3.30.420.40coord: 83..153
e-value: 3.9E-44
score: 152.8
NoneNo IPR availablePANTHERPTHR11937:SF155ACTIN-42A-RELATEDcoord: 21..182
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 6..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18341contigH-elongata_contig18341:3694..6558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18341.4933.1mRNA_H-elongata_contig18341.4933.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18341 3694..6558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18341.4933.1 ID=prot_H-elongata_contig18341.4933.1|Name=mRNA_H-elongata_contig18341.4933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
KVGLLGGKDLDLSNPCDALTLEGVKTKTCFVSENIETDNSKMELSISKPY
TLPDGTTISLGRERYRAAELLFDPATASREEGDSLQDTVLDAILACERKT
WAILAQTVILTGGTTELTGLNRRLQRELTKASRASGIRLKFTVMVPEDDH
NNTVWVGGSMLASTGALDGLWFTRAEYEEYGAGPIHAKFAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin