prot_H-elongata_contig18331.4927.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18331.4927.1
Unique Nameprot_H-elongata_contig18331.4927.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length702
Homology
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI)

HSP 1 Score: 883 bits (2281), Expect = 7.570e-316
Identity = 514/717 (71.69%), Postives = 564/717 (78.66%), Query Frame = 0
Query:    1 SNEGNTKRQRKDDHRT---DEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSSNGKKYKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTXXXXXXXXXXXXXXXHVVRGGYSPGFGGXXXXXXXXXAXXXXXXTGGYAMGXXXXXXXXXXGGRMYPRQGFSGGPRPVPAGGYGQYGVRGGGXXXXXXXYXGG------------IAGGQAVPMGGYAQMAGQSQXXXXXAGGGGYRAGNERDRRDDRRDF 702
            S  G  KRQRKDD      +EVD           ERG KRQKG  N           Y HAVHLRGLPWNASTK++ +F +P++V++  IH+VHN+RGEAYVKLK+E  +E ALKKDRN IGRRYIEVFRSSIED   ++DD  SKG  DG Y+GVVRMRGLPWSANEGDIR FFDG+ I+KDG+++TLNRDGRPSGEAYVVFE+E  AK+ALKRDK+KIGERWID+FEATKGEVYSMTGGGGK G+Q GGVSFDTTDSAYTGVVRMRGLPFEATK+QIR FF  I+VK+++IFIVTRPDGKASGEAFVLF+TEA+AE+AL KDKEKLGDRWIDLF TNKGALYQRVGVGVKMAAKPDAEFRGVLRMRG+PF +GVEEIR FFRGYK+Q+HGVFVVNGGDWRPTGE+YVLFD+EDEAERAFKALDKQKIG+RWIELFR+TKGDLYTATVRST+LGMERGGA+Y   PMTCVKLRGLP+NVTEN+IF+FF+GLTVIGSFICKDVMARPTGEGFVEFA+VDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT                   GG      GXXXXXXXXX XXXXXX       XXXXXX XX            GG RP P GGY  YGVR GGXXXXXXX X              + GG  VPMGGYAQMAG  Q        GGY     RDRRDDRRDF
Sbjct:    2 SENGGDKRQRKDDDGVRGGNEVD----------TERGSKRQKGGGNGAGKGE-----YTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQ-GGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT----------------AANGGNR----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXYXQYXXXXXXXVGGHRPSP-GGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGP-VPMGGYAQMAGGQQF-------GGY----HRDRRDDRRDF 669          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 5.750e-170
Identity = 279/573 (48.69%), Postives = 356/573 (62.13%), Query Frame = 0
Query:   55 YKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKL-QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRST---------------------------ILGMERGG-------------------------------ALYAPT--------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 552
            + H V LRGLPWNA+ KDVT+FL  +E+ ++ +++VHNTRGEAYVKL SE S EA +K DR  +GRRYIEVF +S ED   S++    K   +G   GV+RMRGLPW+A E DI +FF G  ++  GV+I  NR+GRPSGEAYVVF SE DA +A + RDK K+G RWIDLFE+TKGE+Y+ TG   +      G      D  Y GV++MRGLPF+ATK QI  FF    V+D+++FIV   DG+ +G+AFV+F  E DA+ AL  DKEKLG RW+DLFP+ K A+Y+RVG   V+MA++PDA +RGVLRMRG+P++AG  +IR FF  Y + +  G+ V+ G D RP+GEAYV F  ED+A+ A   L K+KIG+R+IELF+ TKGDLYTAT R +                           + G   GG                               AL  P               P TC KLRGLPY VTE  IF FF GL VIG FICKD   RPTGEGFVEF ++  C   ++RNR  M++RY+EVFA +K+DVLQ+I   G
Sbjct:  152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA)

HSP 1 Score: 438 bits (1127), Expect = 6.320e-142
Identity = 233/497 (46.88%), Postives = 319/497 (64.19%), Query Frame = 0
Query:   58 AVHLRGLPWNASTKDVTNFLSP--VEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGG---ALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 548
            AV LRGLPWN+    V  F S   + +  + IH++H   GEA+V+ K+    ++AL  +R  IG RY+EVF +   D A +   + ++GQ+D D+RGVVR+RGLP+SA   +I  FFD   + +DGV+I++NR GRP+GEAYVVFE+E D + A+K+DK ++G RW+D++ +TKG +Y++        +   GV     +  +  VVRMRGLPF+A K  I  FF    + +  I  VT   G+ SGEAFVLFATE +A RAL KDKEKL +RWIDLFP++K  L  RVGVG   A  KPDA  R  +++RG+PF+A V ++R F  G  + +HGV+++NG D RPTG+ YV+F +EDEA RA  A +   +  R +E+ +  K DLY  T+   I    R G     Y+ TPM C +LRGLP+ V E  IF FF G+ VIG F+CKD+  RPTGE FVEF   D  QLA+ RNRE + +RYVEVF  +K DV+ +I
Sbjct:   24 AVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNV--VLADVDEGVDVVFAEEVH--VVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRI 513          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK)

HSP 1 Score: 434 bits (1116), Expect = 8.970e-140
Identity = 234/512 (45.70%), Postives = 316/512 (61.72%), Query Frame = 0
Query:   56 KHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAG-SKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQ--KDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSG--------------GVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGD--WRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 548
            K+AV LRGLPW+ S   +  +L    V    + +     GEA  ++ S    +AA  +DR  +G+RY+EVF    EDY R ++  G ++  +DGDY GV+R+RGLPWSA+  D+  FF G+ ++  + GV+  +NR+GRPSGEAYVVF S A A++ L+RDK ++  RW+DLF ATK EVY+       H  Q+               G+    +D +Y GV+R+RG+PFE TK QIR FFG  ++   D+FIV RPDG+ +G+AF +F +E DA  A   DK+K+G RW+DLFPT K  LYQR G  V  AA+PD E   VLR+RG+PF AG  +IR FFR Y   +HGV+VV   D    P GE YV F   D AERA  ALD+Q +  R++ELF  T+GDLY  T  S +L M+   A+Y    MTCVK+ GLP  V E+ IF FF G+ VIG FIC+D     TGEGF EF ++ + Q   SRN+  M DR V +   +K+DV+++I
Sbjct:  120 KYAVWLRGLPWDTSKDAIKEWLG-AGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENA---HKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREI 627          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.140e-137
Identity = 198/359 (55.15%), Postives = 266/359 (74.09%), Query Frame = 0
Query:  191 RPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 549
            RPSG+A+VVF S   A+ A+K+DK ++G RWIDLF+ TK E+Y +       G     +     D+ Y GV+RMRGLPFEA+K  IR FF    + D +IF+V RPDGK SG+AFV+F +E DA+ AL  DK+++G RW+DLF TNK  LYQRVGV V+MA +PD+ ++GV++MRG+P++ GV +IR+F   +K++ HGV+++NG D RPTGEA+ +  TED+A  A   LDK+++G RW+E+F  +K +LYTAT  S I+GM+   A++  T MTCVKLRGLP+ V EN IFTFF+GL+VIG FIC+D+  R TGEGF EF+S+++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct:    1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQ--IQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 7.050e-129
Identity = 230/547 (42.05%), Postives = 323/547 (59.05%), Query Frame = 0
Query:   59 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY-------------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEV---------YSMTGGGGKHGEQSGGVSFDTTDSAYTG---VVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 548
            + L GLPW  S  DV NFL  + V         I ++ ++ GEA V++ S    E ALK     +G+R++++  ++ E +              A  + DA +   + G+                    +GVVRMRGLP+SA E DI  FF G  +   GV++  +  GR SG+AYVVFE+  +A+ ALK DK KIGERWIDLF ++K E+         Y   GGGG+  E+ GG+       +  G   V+R+RGLPF+ T+  ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++   GVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:   91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC)

HSP 1 Score: 361 bits (926), Expect = 8.050e-113
Identity = 208/524 (39.69%), Postives = 290/524 (55.34%), Query Frame = 0
Query:   59 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY----------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATS 540
            + L GLPW  S  DV NFL  + V         I ++ ++ GEA V++ S    E ALK     +G+R++++  ++ E +              A  + DA +     GD                 +GVVRMRGLP+SA E DI  FF G  + + GV++  +  GR SG+AYVVFE+  +A+ ALK DK KIGERWIDLF ++K E+                                              FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A +
Sbjct:   91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH------------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA)

HSP 1 Score: 299 bits (765), Expect = 8.060e-91
Identity = 155/325 (47.69%), Postives = 211/325 (64.92%), Query Frame = 0
Query:  235 MTGGGG----KHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 548
            M GGGG      G   GG+S          V+R+RGLPF+ T+  ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:    1 MGGGGGIRPGPKGVSIGGISH---------VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.800e-86
Identity = 201/603 (33.33%), Postives = 301/603 (49.92%), Query Frame = 0
Query:   59 VHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYA--RSIDDAGSKGQSDGD------YRGVVRMRGLPWSANEGDIRTFFDG---VPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYT--GVVRMRGLPFEATKTQIRTFFG-----DISVKDT-DIFIVTRPDGKASGEAFVLFATEADAERALTK-DKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGIPFTAGVEEIRAFFRGYKL--QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYA---------------PT------------------------------------------------------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 545
            V LRGLP++ + + V +F   +++ ED + ++ N  GEA+V+ +  +S   A   DR  IG RYIEV  S+  +    R +     +G  +GD      Y GVVRMRGLPW++ E D+R+FFDG   +   + GV+I  + DGR  G AY VF+SE +A  A+  +D+ ++G R+I+LF+ATKGE+ S         + + G S           G+++++GL + AT  QIR FF      ++  K+  D+  V  PDG++SGEAF +F +   A +   K + ++L  RW++L  TN+  +   V      A++P     A + G               LRMRGIP+T  V++++ FF+GY+L    HGV +V+    R  GEAY  F++E+EA RA +A+D+QK+G R++ELFR ++ ++        +  +  GG   A               PT                                                            P+TC KLRGLP++ T   IF FF GL VIG+ + +D   RPTGE F EF S  +  LA  R+R  M  RYVEVF  +KE+VL
Sbjct:   33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQ------RNDATRGPSRPRVPPQLENEGILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAKMRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC)

HSP 1 Score: 259 bits (662), Expect = 2.230e-77
Identity = 123/252 (48.81%), Postives = 172/252 (68.25%), Query Frame = 0
Query:  276 IRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRN 525
            ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSR+
Sbjct:    3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW49_ECTSI7.570e-31671.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Z3_9STRA5.750e-17048.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SQA4_9STRA6.320e-14246.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3XQW7_HETAK8.970e-14045.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XYI2_9STRA1.140e-13755.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D6B4_9STRA7.050e-12942.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z4P9_NANGC8.050e-11339.69Rna binding protein (Fragment) n=1 Tax=Nannochloro... [more]
W7TED5_9STRA8.060e-9147.69RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7R9U5K5_9STRA3.800e-8633.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K8Z4G4_NANGC2.230e-7748.81Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 467..537
e-value: 5.4E-9
score: 45.9
coord: 361..434
e-value: 8.7E-5
score: 31.9
coord: 58..126
e-value: 7.2E-5
score: 32.2
coord: 261..333
e-value: 4.1E-8
score: 43.0
coord: 153..225
e-value: 5.1E-7
score: 39.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 263..328
e-value: 2.3E-8
score: 33.7
coord: 155..219
e-value: 1.0E-6
score: 28.4
coord: 363..429
e-value: 1.1E-5
score: 25.2
coord: 470..532
e-value: 1.2E-6
score: 28.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 260..337
score: 9.831
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 466..541
score: 9.678
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 360..438
score: 9.354
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 152..229
score: 9.746
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 142..240
e-value: 6.7E-26
score: 92.4
coord: 36..141
e-value: 2.9E-21
score: 77.4
coord: 459..553
e-value: 7.9E-23
score: 82.5
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 354..445
e-value: 2.6E-23
score: 83.7
coord: 254..344
e-value: 4.9E-25
score: 89.3
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 153..337
coord: 356..436
coord: 465..544
coord: 36..136
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 50..135
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 142..237
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 262..439
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 458..548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18331contigH-elongata_contig18331:3153..5258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18331.4927.1mRNA_H-elongata_contig18331.4927.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18331 3153..5258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18331.4927.1 ID=prot_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=702bp
SNEGNTKRQRKDDHRTDEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSS
NGKKYKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVK
LKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDY
RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVF
ESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVS
FDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKA
SGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKM
AAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRP
TGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTI
LGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDV
MARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGA
SGTGGAGGPGGGAGGYGGHVVRGGYSPGFGGGGGGGGGGGAGAGGGGTGG
YAMGPGFGGSSSLGGGRMYPRQGFSGGPRPVPAGGYGQYGVRGGGGGNYG
AGYGGGIAGGQAVPMGGYAQMAGQSQIGSQYAGGGGYRAGNERDRRDDRR
DF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf