prot_H-elongata_contig183069.4915.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig183069.4915.1
Unique Nameprot_H-elongata_contig183069.4915.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length34
Homology
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: D7G3Q2_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Q2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.150e-10
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            + R HLSSD RTFVNLLISFVGAG+LGIPFAFRQ
Sbjct:   72 DPRLHLSSDRRTFVNLLISFVGAGVLGIPFAFRQ 105          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: A0A8K1CFQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFQ4_PYTOL)

HSP 1 Score: 55.8 bits (133), Expect = 4.480e-8
Identity = 22/34 (64.71%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            + RQHL+SDTRTF N +I+F+G+G+LG+P+AFRQ
Sbjct:  286 DERQHLASDTRTFANTIIAFLGSGVLGLPYAFRQ 319          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: A0A5D6Y5H3_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5H3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 7.540e-7
Identity = 21/34 (61.76%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            E++ HL+SD RTF N +I+F+G+G+LG+PFAFRQ
Sbjct:   65 ESQPHLTSDARTFANTIIAFLGSGMLGLPFAFRQ 98          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: H6S441_PLAVT (Aminoacid transporter (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S441_PLAVT)

HSP 1 Score: 51.6 bits (122), Expect = 9.510e-7
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            EA  HLSSD +TF+N  I+F+G+G+LG+P+AFRQ
Sbjct:   63 EASLHLSSDLKTFINTCIAFLGSGVLGLPYAFRQ 96          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: A0A5D6YTP0_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YTP0_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 4.940e-6
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    2 ARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            A  HL+SD RTF + +ISF+GAG+LG PFAF+Q
Sbjct:   36 APHHLASDARTFASAIISFLGAGVLGFPFAFKQ 68          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: K3X1R2_GLOUD (Aa_trans domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1R2_GLOUD)

HSP 1 Score: 49.3 bits (116), Expect = 9.250e-6
Identity = 19/34 (55.88%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            ++ QHL+SD +TF + +ISF+G+G+LG PFAF+Q
Sbjct:   40 DSPQHLASDAKTFASAIISFLGSGVLGFPFAFKQ 73          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: UPI00125DEB0D (amino acid transporter AVT3C-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125DEB0D)

HSP 1 Score: 47.0 bits (110), Expect = 6.060e-5
Identity = 18/32 (56.25%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    3 RQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            + HLSS T+TF N+ I+ VGAG+LG+P+AF++
Sbjct:   29 QNHLSSQTKTFANIFIAVVGAGVLGLPYAFKR 60          
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Match: UPI00125CFD83 (amino acid transporter AVT3C-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125CFD83)

HSP 1 Score: 46.6 bits (109), Expect = 8.290e-5
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    3 RQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ 34
            + HLSS T+TF N+ I+ VGAG+LG+P+ FR+
Sbjct:   30 QHHLSSQTKTFANVFIAIVGAGVLGLPYTFRR 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig183069.4915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G3Q2_ECTSI4.150e-1085.29Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A8K1CFQ4_PYTOL4.480e-864.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y5H3_9STRA7.540e-761.76Aa_trans domain-containing protein n=1 Tax=Pythium... [more]
H6S441_PLAVT9.510e-761.76Aminoacid transporter (Fragment) n=1 Tax=Plasmopar... [more]
A0A5D6YTP0_9STRA4.940e-663.64Aa_trans domain-containing protein n=1 Tax=Pythium... [more]
K3X1R2_GLOUD9.250e-655.88Aa_trans domain-containing protein n=1 Tax=Globisp... [more]
UPI00125DEB0D6.060e-556.25amino acid transporter AVT3C-like n=2 Tax=Ipomoea ... [more]
UPI00125CFD838.290e-556.25amino acid transporter AVT3C-like n=2 Tax=Ipomoea ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig183069contigH-elongata_contig183069:149..250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig183069.4915.1mRNA_H-elongata_contig183069.4915.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig183069 149..250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig183069.4915.1 ID=prot_H-elongata_contig183069.4915.1|Name=mRNA_H-elongata_contig183069.4915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=34bp
EARQHLSSDTRTFVNLLISFVGAGILGIPFAFRQ
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