prot_H-elongata_contig1830.4913.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1830.4913.1
Unique Nameprot_H-elongata_contig1830.4913.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
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BLAST of mRNA_H-elongata_contig1830.4913.1 vs. uniprot
Match: D8LFE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE7_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 8.690e-76
Identity = 125/212 (58.96%), Postives = 159/212 (75.00%), Query Frame = 0 
Query:    1 QREEAYNLFQYIDVDEDQRVAAWELARFFPYAIGCTREEKLELSFLCDNIGLKVEEDEEEMIVVAGWEEDSAASRHPSLMVGMRLLSIDGWDLPCALEII----NGTSIGGSLKSSLRECERVLESL-----QIEQTMLHVLEVATPAFVVTKNNRWLDMDIDGDAISVALPLGIYHTRKALFSAVQDAGRDQHPEQLRLFGVKHSSNQPFV 203
            +R+ AY+LF+++DV    R+ AWELARFFP AIGCT +  +E++F C+ +GL VEEDEE M+VVAGWEEDSAA+ HPSLM+GMR+LSIDGWDLPCAL             G+ KSSLR+CE VLE+L     +  +  LHVLEVA PA VVTK+N WLDMD+ G A++V++PLG+Y+T  A F+A+Q+AGRDQHP +LR FGVK    QPFV
Sbjct:   97 ERQRAYSLFEHLDVTCSHRIYAWELARFFPPAIGCTTDNVVEIAFTCNTLGLTVEEDEEGMVVVAGWEEDSAAAEHPSLMIGMRILSIDGWDLPCALTAAASRHGAPGRDGTFKSSLRKCESVLEALSEGDMEDGENALHVLEVAMPAIVVTKSNTWLDMDVSGVAVAVSVPLGVYNTIGAYFTALQEAGRDQHPTELRHFGVKFDPAQPFV 308
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1830.4913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFE7_ECTSI8.690e-7658.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 13..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1830contigH-elongata_contig1830:14169..15626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1830.4913.1mRNA_H-elongata_contig1830.4913.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1830 14169..15626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1830.4913.1 ID=prot_H-elongata_contig1830.4913.1|Name=mRNA_H-elongata_contig1830.4913.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
QREEAYNLFQYIDVDEDQRVAAWELARFFPYAIGCTREEKLELSFLCDNI
GLKVEEDEEEMIVVAGWEEDSAASRHPSLMVGMRLLSIDGWDLPCALEII
NGTSIGGSLKSSLRECERVLESLQIEQTMLHVLEVATPAFVVTKNNRWLD
MDIDGDAISVALPLGIYHTRKALFSAVQDAGRDQHPEQLRLFGVKHSSNQ
PFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS