prot_H-elongata_contig18283.4907.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18283.4907.1
Unique Nameprot_H-elongata_contig18283.4907.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length129
Homology
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.940e-20
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0
Query:   28 YSRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGADGYAPRG 71
            Y+RRPGDWECPSCGNNCFASR+ECNRCQTPKP GAG  GY  RG
Sbjct:   49 YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYGERG 92          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: D7FHH5_ECTSI (Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH5_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.420e-17
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:   28 YSRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGADGY 67
            Y+RRPGDWECP+CGNNCFASR+ECNRCQTPKP GAG   Y
Sbjct:   49 YNRRPGDWECPNCGNNCFASRVECNRCQTPKPVGAGGXXY 88          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: D8LIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ0_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.050e-14
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0
Query:   29 SRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAG 63
            ++RPGDWECPSCGNNCFASR ECNRCQTPKP GAG
Sbjct:   47 NKRPGDWECPSCGNNCFASRSECNRCQTPKPAGAG 81          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 6.150e-10
Identity = 26/31 (83.87%), Postives = 26/31 (83.87%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEG 61
            R GDW CPSCGNNCFA R ECNRCQTPKP G
Sbjct:  144 RDGDWACPSCGNNCFAFRNECNRCQTPKPSG 174          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A2V0NK80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NK80_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 1.430e-9
Identity = 25/33 (75.76%), Postives = 27/33 (81.82%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAG 63
            RPGDW CPSCGNNC+A R  CNRC TPKP+G G
Sbjct:  147 RPGDWPCPSCGNNCYAFRNACNRCGTPKPDGGG 179          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A5J4XE95_9CHLO (RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XE95_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-8
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAG 63
            RPGDW CP+C N CFAS+ +CNRC TPKP GAG
Sbjct:  245 RPGDWPCPNCNNICFASKDKCNRCDTPKPPGAG 277          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A7S0F4W8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F4W8_9CRYP)

HSP 1 Score: 61.6 bits (148), Expect = 1.400e-8
Identity = 22/37 (59.46%), Postives = 31/37 (83.78%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAGADGY 67
            RPGDW+CP CG+N FAS++ C +C+TPKP+G+ + GY
Sbjct:  143 RPGDWQCPGCGSNVFASKMICYKCRTPKPDGSSSQGY 179          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: L1JKK8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKK8_GUITC)

HSP 1 Score: 61.6 bits (148), Expect = 1.450e-8
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEGAGADGY 67
            RPGDW+CP CG+N FAS++ C +C+TPKPEGA +  Y
Sbjct:  156 RPGDWQCPGCGSNVFASKMICYKCRTPKPEGASSQAY 192          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A7S3BW32_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BW32_9VIRI)

HSP 1 Score: 58.5 bits (140), Expect = 1.500e-8
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
Query:   31 RPGDWECPSCGNNCFASRIECNRCQTPKPEG 61
            RPGDW CPSCG N FAS+  C RCQTPKP+G
Sbjct:   27 RPGDWTCPSCGANVFASKNSCYRCQTPKPDG 57          
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Match: A0A6G1SNK9_9ACAR (RNA-binding protein EWS n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1SNK9_9ACAR)

HSP 1 Score: 59.7 bits (143), Expect = 3.360e-8
Identity = 26/38 (68.42%), Postives = 27/38 (71.05%), Query Frame = 0
Query:   29 SRRPGDWECPSCGNNCFASRIECNRCQTPKPEGAGADG 66
            S RPGDW CPSC NN FA R ECNRC+T KP  AG  G
Sbjct:  154 SGRPGDWACPSCNNNNFAYRQECNRCKTQKPHSAGGGG 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18283.4907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL5_9PHAE9.940e-2084.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH5_ECTSI3.420e-1782.50Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocar... [more]
D8LIQ0_ECTSI1.050e-1488.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8L8_9PHAE6.150e-1083.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V0NK80_9CHLO1.430e-975.76Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A5J4XE95_9CHLO1.160e-872.73RNA-binding cabeza n=1 Tax=Trebouxia sp. A1-2 TaxI... [more]
A0A7S0F4W8_9CRYP1.400e-859.46Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1JKK8_GUITC1.450e-862.16Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S3BW32_9VIRI1.500e-874.19Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A6G1SNK9_9ACAR3.360e-868.42RNA-binding protein EWS n=1 Tax=Aceria tosichella ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 33..57
e-value: 3.3E-7
score: 39.9
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 31..59
e-value: 4.2E-9
score: 35.6
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 31..60
score: 10.794
NoneNo IPR availableGENE3D4.10.1060.10coord: 25..62
e-value: 1.3E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR23238:SF26GH13594P-RELATEDcoord: 7..90
IPR034870TAF15/EWS/TLS familyPANTHERPTHR23238RNA BINDING PROTEINcoord: 7..90
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 24..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18283contigH-elongata_contig18283:6430..6816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18283.4907.1mRNA_H-elongata_contig18283.4907.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18283 5243..6816 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18283.4907.1 ID=prot_H-elongata_contig18283.4907.1|Name=mRNA_H-elongata_contig18283.4907.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
MSYYHDGGGYGGGGGYGGGNHGGGGGGYSRRPGDWECPSCGNNCFASRIE
CNRCQTPKPEGAGADGYAPRGGGGGGGGYGGGGGYSGGGGYSGGGGYSGG
GGGYSGGGGGYTGGGGGGGGYSRRPGDW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR034870TET_fam
IPR036443Znf_RanBP2_sf