prot_H-elongata_contig182292.4888.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig182292.4888.1
Unique Nameprot_H-elongata_contig182292.4888.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 5.820e-14
Identity = 36/44 (81.82%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNMLYD    +E G L DVFAVVFDEFHYMNDRDRGTV
Sbjct:  470 MTTEVFRNMLYDS---EETGELDDVFAVVFDEFHYMNDRDRGTV 510          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A6H5L357_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L357_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 7.130e-14
Identity = 36/44 (81.82%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNMLYD    +E G L DVFAVVFDEFHYMNDRDRGTV
Sbjct:  128 MTTEVFRNMLYDS---EETGDLDDVFAVVFDEFHYMNDRDRGTV 168          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    1 MTTEVFRNMLYDER----GDKEAGA------LQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNMLYD      G + A A      L+DVFAVVFDEFHYMNDRDRGTV
Sbjct:  212 MTTEVFRNMLYDSAAGIVGGEGAAATLGPDELKDVFAVVFDEFHYMNDRDRGTV 265          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: F0YPB7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPB7_AURAN)

HSP 1 Score: 66.2 bits (160), Expect = 2.070e-11
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNM+YD+ G  E    +DVFAVVFDEFHYMND  RGTV
Sbjct:   94 MTTEVFRNMIYDDEGRAEIA--KDVFAVVFDEFHYMNDAQRGTV 135          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: F0YDH3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDH3_AURAN)

HSP 1 Score: 66.2 bits (160), Expect = 2.180e-11
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNM+YD+ G  E    +DVFAVVFDEFHYMND  RGTV
Sbjct:  166 MTTEVFRNMIYDDEGRAEIA--KDVFAVVFDEFHYMNDAQRGTV 207          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A7S0QGM8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QGM8_9CRYP)

HSP 1 Score: 65.5 bits (158), Expect = 2.250e-11
Identity = 30/44 (68.18%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            +TTEV+RNMLYD    KE+G + DV +V+ DEFHYMNDRDRGTV
Sbjct:  125 LTTEVYRNMLYD----KESGTVSDVHSVILDEFHYMNDRDRGTV 164          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A7S4DB23_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB23_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 6.610e-11
Identity = 32/44 (72.73%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEVFRNMLY+E        L DVFAVVFDEFHYMND  RGTV
Sbjct:   89 MTTEVFRNMLYEEED------LLDVFAVVFDEFHYMNDPSRGTV 126          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A7S1HGB1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HGB1_HEMAN)

HSP 1 Score: 62.0 bits (149), Expect = 1.400e-10
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            +TTEV+RNMLYD    K++ A++DV +V+ DEFHYMNDR+RGTV
Sbjct:   73 LTTEVYRNMLYD----KDSDAVRDVHSVILDEFHYMNDRERGTV 112          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: A0A7S0YW95_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YW95_9CRYP)

HSP 1 Score: 62.0 bits (149), Expect = 3.140e-10
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            +TTEV+RNMLYD    K++ A++DV +V+ DEFHYMNDR+RGTV
Sbjct:   98 LTTEVYRNMLYD----KDSDAVRDVHSVILDEFHYMNDRERGTV 137          
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Match: W7TFJ8_9STRA (Dsh domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFJ8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.990e-10
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    1 MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTV 44
            MTTEV+RNMLY   GD  AG L  VFAVVFDEFHYMND +RGTV
Sbjct:    1 MTTEVYRNMLYT--GD--AGELDQVFAVVFDEFHYMNDPERGTV 40          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig182292.4888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G373_ECTSI5.820e-1481.82DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L357_9PHAE7.130e-1481.82Helicase ATP-binding domain-containing protein n=1... [more]
A0A835Z819_9STRA1.170e-1168.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
F0YPB7_AURAN2.070e-1172.73Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0YDH3_AURAN2.180e-1172.73Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S0QGM8_9CRYP2.250e-1168.18Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S4DB23_HETAK6.610e-1172.73Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1HGB1_HEMAN1.400e-1063.64Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0YW95_9CRYP3.140e-1063.64Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
W7TFJ8_9STRA4.990e-1075.00Dsh domain protein n=1 Tax=Nannochloropsis gaditan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..51
e-value: 1.9E-8
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig182292contigH-elongata_contig182292:478..633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig182292.4888.1mRNA_H-elongata_contig182292.4888.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig182292 469..633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig182292.4888.1 ID=prot_H-elongata_contig182292.4888.1|Name=mRNA_H-elongata_contig182292.4888.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MTTEVFRNMLYDERGDKEAGALQDVFAVVFDEFHYMNDRDRGTVRRTHIC
R*
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