prot_H-elongata_contig181587.4863.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig181587.4863.1
Unique Nameprot_H-elongata_contig181587.4863.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
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BLAST of mRNA_H-elongata_contig181587.4863.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 3.830e-10
Identity = 35/52 (67.31%), Postives = 47/52 (90.38%), Query Frame = 0 
Query:    1 QAKRRALASTDGKLAAVAKARSAKDDEMKGLERSLVEVLVEQQKKLLALLSE 52
            +AKR+AL + DGKL  +A++R+ K++EMKGLER+LV+VLVEQQKKLL+LLSE
Sbjct: 2184 EAKRKALVAVDGKLGGLAESRAEKEEEMKGLERTLVQVLVEQQKKLLSLLSE 2235
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181587.4863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMX2_ECTSI3.830e-1067.31Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181587contigH-elongata_contig181587:317..475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181587.4863.1mRNA_H-elongata_contig181587.4863.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig181587 317..475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig181587.4863.1 ID=prot_H-elongata_contig181587.4863.1|Name=mRNA_H-elongata_contig181587.4863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
QAKRRALASTDGKLAAVAKARSAKDDEMKGLERSLVEVLVEQQKKLLALL
SEV
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