prot_H-elongata_contig181421.4856.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig181421.4856.1
Unique Nameprot_H-elongata_contig181421.4856.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.430e-19
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMGTLD+YVADLEE LLANT++HYARKSQEWIETDSTPDYMIK 
Sbjct:  189 MGMGTLDSYVADLEEALLANTKDHYARKSQEWIETDSTPDYMIKA 233          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.830e-15
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMGTL+AY AD EE +L NTRE+YARKSQ+W+E DSTPDY+IK 
Sbjct:  191 MGMGTLEAYTADFEEAMLDNTREYYARKSQQWVEGDSTPDYLIKA 235          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7S4ILC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ILC2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.160e-15
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMGTLDAY ADLE PLL +TRE+YA+K QEWI +DSTPDY+IK 
Sbjct:  193 MGMGTLDAYTADLEGPLLDSTREYYAKKRQEWIVSDSTPDYLIKA 237          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A1Z5KSR7_FISSO (Cullin 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSR7_FISSO)

HSP 1 Score: 75.9 bits (185), Expect = 7.160e-15
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKVGG 47
            MGMG+L+AY ADLE+PLL +TREHYARK +EWI  DSTPDYMIK  G
Sbjct:  190 MGMGSLEAYTADLEQPLLESTREHYARKREEWI-NDSTPDYMIKAEG 235          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7R9ZBG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBG0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.160e-15
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMGTLDAY ADLE PLL +TRE+YA+K QEWI +DSTPDY+IK 
Sbjct:  227 MGMGTLDAYTADLEGPLLDSTREYYAKKRQEWIVSDSTPDYLIKA 271          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7S2UHW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHW6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.340e-14
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMG+LDAY ADLE PLL +TR +Y +K QEWIETDSTPDY+IK 
Sbjct:  196 MGMGSLDAYAADLEAPLLDSTRAYYVKKRQEWIETDSTPDYLIKA 240          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7S1B6G2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6G2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.340e-14
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMGTLDAYVAD E+PLL NTRE+Y  + QEWI TDSTP+Y+IK 
Sbjct:  188 MGMGTLDAYVADFEQPLLQNTREYYRLRRQEWIVTDSTPEYLIKA 232          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7S1VSX6_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VSX6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.410e-14
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMG+L+AYVADLE PLL +TRE Y +K QEWI TDSTPDY+IK 
Sbjct:  188 MGMGSLEAYVADLETPLLESTREFYGQKRQEWIATDSTPDYLIKA 232          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A7S3UPV7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPV7_HETAK)

HSP 1 Score: 72.8 bits (177), Expect = 3.500e-14
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    3 MGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MG+LDAY +DLEEPLLA ++E YARKSQEWI++DSTPDYM+K 
Sbjct:    1 MGSLDAYNSDLEEPLLAASQEFYARKSQEWIQSDSTPDYMVKA 43          
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Match: A0A6V2KK72_9STRA (Hypothetical protein n=9 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6V2KK72_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.190e-13
Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 0
Query:    1 MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKV 45
            MGMG+LDAY +DLE PLL +TRE+YA+K +EWI +DSTPDY+IK 
Sbjct:  163 MGMGSLDAYTSDLEGPLLDSTREYYAKKREEWIASDSTPDYLIKA 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181421.4856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYW9_9PHAE2.430e-1988.89CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YLK2_9STRA3.830e-1573.33Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S4ILC2_9STRA7.160e-1575.56Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5KSR7_FISSO7.160e-1574.47Cullin 1 n=2 Tax=Fistulifera solaris TaxID=1519565... [more]
A0A7R9ZBG0_9STRA7.160e-1575.56Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2UHW6_9STRA1.340e-1473.33Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1B6G2_9STRA1.340e-1473.33Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1VSX6_9STRA3.410e-1473.33Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S3UPV7_HETAK3.500e-1474.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6V2KK72_9STRA1.190e-1368.89Hypothetical protein n=9 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1310.10coord: 1..47
e-value: 9.7E-10
score: 40.6
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 5..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig181421contigH-elongata_contig181421:438..578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig181421.4856.1mRNA_H-elongata_contig181421.4856.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig181421 438..605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig181421.4856.1 ID=prot_H-elongata_contig181421.4856.1|Name=mRNA_H-elongata_contig181421.4856.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
MGMGTLDAYVADLEEPLLANTREHYARKSQEWIETDSTPDYMIKVGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016159Cullin_repeat-like_dom_sf