prot_H-elongata_contig18064.4812.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18064.4812.1
Unique Nameprot_H-elongata_contig18064.4812.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length186
Homology
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Match: D7FXT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT7_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.070e-38
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 0
Query:    4 PCKKPSTGITRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPRDIIISERRMKIEVYH----MRKTGELIPFIYQRFEEIVSWQLVRWIWHT-TFYKDVSHVMFYEDLQASPTALISLAASMGLDCSEEQALDVLARHKNQSPHGNFNSYDLPSGTIEYMNATMSKILPREILGRYGLSP 182
            PC       TR+ L  C+  TS  C + MPS DP VRR+ ++ RDPRD+ +SER M+++ Y     +RK    + F  +RFE +VSW   R++WHT T     SHV+FYEDL+      I +A  MGL CSEE AL+V   H+N +PHG+++++ L   T+++MN TM+++LP  +  R+G++P
Sbjct:  199 PCLDEEDTPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIIRDPRDVAMSEREMRMKYYRDPAWIRKATPDV-FARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLTCSEEDALEVWRAHRNPAPHGDYSTHGLKQETVQWMNETMARLLPPSLALRWGVTP 381          
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Match: A0A6H5L6E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E2_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 4.830e-38
Identity = 79/184 (42.93%), Postives = 115/184 (62.50%), Query Frame = 0
Query:    4 PCKKPSTGITRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPRDIIISERRMKIEVYH----MRKTGELIPFIYQRFEEIVSWQLVRWIWHT-TFYKDVSHVMFYEDLQASPTALISLAASMGLDCSEEQALDVLARHKNQSPHGNFNSYDLPSGTIEYMNATMSKILPREILGRYGLSP 182
            PC       TR+ L  C+  TS  C + M S DP VRR+ ++ RDPRD+ +SER M+I+ Y     +RKT   + F  +RFE +VSW   R++WHT T     SHV+FYEDL+      I +A  MGL CSEE AL+V   H+N +PHG+++++ L   TI++MN TM+++LP  +  R+G++P
Sbjct:  265 PCLDEEETPTRERLRACLFNTSALCVQYMASVDPDVRRSMVIIRDPRDVAMSEREMRIKYYREPAWIRKTTPDV-FARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLACSEEDALEVWRAHRNPAPHGDYSTHGLQLETIQWMNETMARLLPPSLAFRWGVTP 447          
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Match: A0A6H5L183_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 5.730e-37
Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 0
Query:   13 TRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPRDIIISERRMKIEVYHMRK---TGELIPFIYQRFEEIVSWQLVRWIWHT-TFYKDVSHVMFYEDLQASPTALISLAASMGLDCSEEQALDVLARHKNQSPHGNFNSYDLPSGTIEYMNATMSKILPREILGRYGLSP 182
            TR+ L  C+  T++ C   M S DP VRR+ ++FRDPRD++ISE +M+ +V+H      +  L  F+  +FE +VSW   R++WHT       SHV FY++LQ SP   + +A  MGL+CSE+QA  V   HK  SP+G F +  L   TI++MNATM+++LP  +  ++GL+P
Sbjct:  225 TRERLESCLWNTTKRCVNYMTSTDPAVRRSIVLFRDPRDVVISEYKMRTQVFHRDPWIASLSLEEFVQFKFEVLVSWLHQRYMWHTGDLMGPSSHVEFYDELQKSPVGFVGIARLMGLECSEDQAYKVWKAHKQASPNGGF-ATRLGEATIQFMNATMARLLPPSVAIQWGLTP 397          
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Match: A0A6H5JZR3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR3_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 5.800e-36
Identity = 74/174 (42.53%), Postives = 105/174 (60.34%), Query Frame = 0
Query:   13 TRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPRDIIISERRMKIEVYHMRK---TGELIPFIYQRFEEIVSWQLVRWIWHT-TFYKDVSHVMFYEDLQASPTALISLAASMGLDCSEEQALDVLARHKNQSPHGNFNSYDLPSGTIEYMNATMSKILPREILGRYGLSP 182
            TRD L+ C+  TS SC   MPS DP VRR+ ++ RDPR+++ISE  M+ +V    +   T  L  FI  +FE +VSW   R++WHT T     SH+  YE+LQ S   LI +A  MGL CSE+QA  V    ++ SP G + S  L   T+ +MNATM+++LP  +  R+ ++P
Sbjct:  122 TRDRLVSCLYDTSASCVRHMPSADPAVRRSIVIMRDPRNVVISEYMMRTQVIERERWTRTFSLDEFIMWKFEVLVSWIHQRYMWHTGTLMGPSSHITVYEELQRSHLGLIDIAGFMGLQCSEQQAAKVWIGRRHPSPSGGYASRGLSVETVSFMNATMARLLPPALALRWDVTP 295          
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Match: A0A6H5JLX3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.220e-18
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   13 TRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPRDIIISERRMKIEVYHMRKTGELI--PFIYQRFEEIVSWQLVRWIWHT-TFYKDVSHVMFYEDLQ 111
            TR+ L  C+  TS  C   +PS     RRTA++ RDPRD+++SE RM+ + YH  +   +    FI+ RF+ IVSW   RW+WHT T   + SHVMFY+DLQ
Sbjct:   98 TREQLTGCLWNTSSRCMGFVPSES---RRTAVMLRDPRDVVLSEFRMRRDYYHQEEVMAISVDDFIWDRFQTIVSWTHQRWVWHTETVLSESSHVMFYDDLQ 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18064.4812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXT7_ECTSI1.070e-3841.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6E2_9PHAE4.830e-3842.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L183_9PHAE5.730e-3742.53Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JZR3_9PHAE5.800e-3642.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLX3_9PHAE3.220e-1846.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 23..168
e-value: 9.1E-7
score: 30.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 44..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18064contigH-elongata_contig18064:3562..5071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18064.4812.1mRNA_H-elongata_contig18064.4812.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18064 3556..6220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18064.4812.1 ID=prot_H-elongata_contig18064.4812.1|Name=mRNA_H-elongata_contig18064.4812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp
MKSPCKKPSTGITRDSLLQCMPATSESCAELMPSRDPTVRRTAIVFRDPR
DIIISERRMKIEVYHMRKTGELIPFIYQRFEEIVSWQLVRWIWHTTFYKD
VSHVMFYEDLQASPTALISLAASMGLDCSEEQALDVLARHKNQSPHGNFN
SYDLPSGTIEYMNATMSKILPREILGRYGLSPISS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase