prot_H-elongata_contig180625.4810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig180625.4810.1
Unique Nameprot_H-elongata_contig180625.4810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
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BLAST of mRNA_H-elongata_contig180625.4810.1 vs. uniprot
Match: A0A6H5L4C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C8_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 2.250e-5
Identity = 63/178 (35.39%), Postives = 76/178 (42.70%), Query Frame = 0 
Query:    1 LQVLANLPVSARALNKRVAPAGVTSIFGRMNSDASGINSGG--IGTGGTSGSST----------------GHRFRRPAAVG-------------------SLGGRGGPGAVPGRRDHGGSGGVGSSASASSDGVNKGRLGCPFASVLKARESLLVAEWVLEPESRAVGMRKPSFEGPV 141
            +QVL NLPVSARA NKR    G ++IF RMNS A  +NSG   +G G                       G+ F                          + G   G   +PG     GSG  G S           R G    +  +A+ESLLVAEWV EPES AVGMR  +FEGP+
Sbjct:  876 IQVLTNLPVSARAFNKRGIGGGRSNIFSRMNSFAP-MNSGSSMVGAGXXXXXXXXXXXXXXXXXHRRFVKGNSFNXXXXXXXXXXXXXXXXXXXXTNGTVTTGPHCGTVLLPGLGQEAGSGKAGDS-----------RCGTVIFNA-RAKESLLVAEWVFEPESEAVGMRGAAFEGPL 1040
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180625.4810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4C8_9PHAE2.250e-535.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig180625contigH-elongata_contig180625:133..582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig180625.4810.1mRNA_H-elongata_contig180625.4810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig180625 133..582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig180625.4810.1 ID=prot_H-elongata_contig180625.4810.1|Name=mRNA_H-elongata_contig180625.4810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
LQVLANLPVSARALNKRVAPAGVTSIFGRMNSDASGINSGGIGTGGTSGS
STGHRFRRPAAVGSLGGRGGPGAVPGRRDHGGSGGVGSSASASSDGVNKG
RLGCPFASVLKARESLLVAEWVLEPESRAVGMRKPSFEGPVVSEELAVL*
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