prot_H-elongata_contig18062.4809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18062.4809.1
Unique Nameprot_H-elongata_contig18062.4809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length126
Homology
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A6H5K232_9PHAE (eIF2B_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K232_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 9.070e-81
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIRNAVK 125
            +TLWANFQDICQLMKRQPEHVF FVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRA+RNAVK
Sbjct:  138 KTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 258          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A836CND3_9STRA (Eukaryotic initiation factor 2 beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND3_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.150e-77
Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIRNAVK 125
            +T+WANFQ+IC+LMKR PEHVF FVVAELGTEGS+DGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRL FVHCQDCGSSRSVAP+RSGFHAQTRADRRAIRNAVK
Sbjct:  110 KTVWANFQEICKLMKRSPEHVFSFVVAELGTEGSVDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLHFVHCQDCGSSRSVAPVRSGFHAQTRADRRAIRNAVK 230          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A7S2D5T9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5T9_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.470e-71
Identity = 104/117 (88.89%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLWANFQDIC+ M+R PEHVF F +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRD VSRLFF+HCQDCGSSRSVAPIR GFHAQTRADRRA+R
Sbjct:  104 KTLWANFQDICKSMRRNPEHVFSFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDSVSRLFFMHCQDCGSSRSVAPIRQGFHAQTRADRRAMR 220          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A7S2SBF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.560e-70
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLWANFQDIC+ M+R PEHVFQF +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTRADRRA+R
Sbjct:  112 KTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 228          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: F0XZH3_AURAN (eIF2B_5 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH3_AURAN)

HSP 1 Score: 212 bits (539), Expect = 1.500e-68
Identity = 98/114 (85.96%), Postives = 108/114 (94.74%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRR 118
            +TLW NFQ+IC++M R PEHVFQF +AELGTEGSIDG QRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSP+T+LTRD VSRLFF+HCQDCGSSRSVAPIR+GFHAQTRADRR
Sbjct:   41 KTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: M4B8Q4_HYAAE (eIF2B_5 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8Q4_HYAAE)

HSP 1 Score: 212 bits (539), Expect = 2.450e-68
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLW NFQ+ICQ+M R PEHV QF +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct:   52 KTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 168          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A5D6XJH0_9STRA (eIF2B_5 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJH0_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.280e-67
Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLW NFQ+ICQ+M R PEHV QF +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI+EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct:  114 KTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYIMEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 230          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: H3GGU4_PHYRM (eIF2B_5 domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GGU4_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 1.930e-67
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLW NFQ+ICQ+M R PEHV QF +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TRADRRA R
Sbjct:  116 KTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 232          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A7S2SBF3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.070e-67
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLWANFQDIC+ M+R PEHVFQF +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTRADRRA+R
Sbjct:  368 KTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 484          
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Match: A0A2D4BXT7_PYTIN (Eukaryotic translation initiation factor 2 subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXT7_PYTIN)

HSP 1 Score: 212 bits (540), Expect = 2.550e-67
Identity = 99/117 (84.62%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    5 QTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRAIR 121
            +TLW NFQ+ICQ+M R PEHV QF +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYVTCQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSV+ IRSGFHA TRADRRA R
Sbjct:  136 KTLWVNFQEICQMMHRNPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVSAIRSGFHAATRADRRAAR 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18062.4809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K232_9PHAE9.070e-8197.52eIF2B_5 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CND3_9STRA1.150e-7792.56Eukaryotic initiation factor 2 beta subunit n=1 Ta... [more]
A0A7S2D5T9_9STRA1.470e-7188.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SBF4_9STRA1.560e-7087.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0XZH3_AURAN1.500e-6885.96eIF2B_5 domain-containing protein (Fragment) n=1 T... [more]
M4B8Q4_HYAAE2.450e-6884.62eIF2B_5 domain-containing protein n=1 Tax=Hyaloper... [more]
A0A5D6XJH0_9STRA1.280e-6784.62eIF2B_5 domain-containing protein n=1 Tax=Pythium ... [more]
H3GGU4_PHYRM1.930e-6784.62eIF2B_5 domain-containing protein n=21 Tax=Peronos... [more]
A0A7S2SBF3_9STRA2.070e-6787.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4BXT7_PYTIN2.550e-6784.62Eukaryotic translation initiation factor 2 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002735Translation initiation factor IF2/IF5SMARTSM00653eIF2Bneu4coord: 5..99
e-value: 1.8E-31
score: 120.5
IPR002735Translation initiation factor IF2/IF5PFAMPF01873eIF-5_eIF-2Bcoord: 5..98
e-value: 9.0E-33
score: 112.6
NoneNo IPR availableGENE3D3.30.70.3150coord: 3..93
e-value: 1.1E-29
score: 104.2
NoneNo IPR availablePANTHERPTHR23001EUKARYOTIC TRANSLATION INITIATION FACTORcoord: 5..114
NoneNo IPR availablePANTHERPTHR23001:SF16coord: 5..114
IPR016189Translation initiation factor IF2/IF5, N-terminalSUPERFAMILY100966Translation initiation factor 2 beta, aIF2beta, N-terminal domaincoord: 5..70
IPR016190Translation initiation factor IF2/IF5, zinc-bindingSUPERFAMILY75689Zinc-binding domain of translation initiation factor 2 betacoord: 67..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18062contigH-elongata_contig18062:4265..5252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18062.4809.1mRNA_H-elongata_contig18062.4809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18062 4265..5252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18062.4809.1 ID=prot_H-elongata_contig18062.4809.1|Name=mRNA_H-elongata_contig18062.4809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
MCVPQTLWANFQDICQLMKRQPEHVFQFVVAELGTEGSIDGNQRLVLRGK
YVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSR
SVAPIRSGFHAQTRADRRAIRNAVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002735Transl_init_fac_IF2/IF5
IPR016189Transl_init_fac_IF2/IF5_N
IPR016190Transl_init_fac_IF2/IF5_Zn-bd