prot_H-elongata_contig1802.4794.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1802.4794.1
Unique Nameprot_H-elongata_contig1802.4794.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length531
Homology
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BLAST of mRNA_H-elongata_contig1802.4794.1 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 6.510e-121
Identity = 186/299 (62.21%), Postives = 226/299 (75.59%), Query Frame = 0 
Query:    1 MPPTHPLSTPCRYGYNCTRPGCFFTHPKGMNKEHGQHPKHQQPQQAXXXXXXXXXXXXXXXXXXGRMMDQLRPGIDYCAACALVRPAELARVSAAFMSAFPASDDGNDRSDFVAAVPMSVAFQDWKRYRGVSTTGTPNGVLSSLEKVKLFPRTRKSERLLQDPANRSSLRWSPTPYRPWKTLERMATHDQFWEENQEMYLLCAGYESTPPATGMCIELSVTSVVKSEDGGDAVKAGMRVAGEVLGLPDVQSHKWFVFHLSHPEESDDETVFVTVKAILDTSKMP--TSYHRPERRPPYA 297
            MPPT PLSTPCRYGYNCTRP CF+ HPK M+K+    PK ++P         XXXXXX      GR+MDQLR  IDYC++  LVRP EL RVSAAF +AFPA +DG DR DFVAAVP+ +A+ DW+RYRG+STTGTP+GV S+ ++++L+PRTRK ERLLQDP NR  +RWSPTPYRPWKTLERMATHDQ+WE NQ+ YLLCAGYE+ PP +G+ IELSVT ++K+ED GD  +AG RVA EVLGLP     KWFVFH+S P+E+ +E   +T++AI+DTSKMP     H P R P  A
Sbjct:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMHKDR---PKDERP--LCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPGVPRPHEPGRAPQLA 294
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1802.4794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7D8_ECTSI6.510e-12162.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1670coord: 1..71
e-value: 6.8E-9
score: 38.0
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 468..530
e-value: 6.9E-9
score: 37.3
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 468..523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1802contigH-elongata_contig1802:1816..7118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1802.4794.1mRNA_H-elongata_contig1802.4794.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1802 1085..7302 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1802.4794.1 ID=prot_H-elongata_contig1802.4794.1|Name=mRNA_H-elongata_contig1802.4794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=531bp
MPPTHPLSTPCRYGYNCTRPGCFFTHPKGMNKEHGQHPKHQQPQQACTFG
RSCFRKVCNFEHPDGRMMDQLRPGIDYCAACALVRPAELARVSAAFMSAF
PASDDGNDRSDFVAAVPMSVAFQDWKRYRGVSTTGTPNGVLSSLEKVKLF
PRTRKSERLLQDPANRSSLRWSPTPYRPWKTLERMATHDQFWEENQEMYL
LCAGYESTPPATGMCIELSVTSVVKSEDGGDAVKAGMRVAGEVLGLPDVQ
SHKWFVFHLSHPEESDDETVFVTVKAILDTSKMPTSYHRPERRPPYAGAQ
SLSSLAAAKFPTRSPSAHSTAVPASTLAAAQFPTRSPSAHPSVVPVSRSP
GMVSPIGTALPVSSYGALTDAFVMPRSLSVPTPTSVASASSLSLASTDLE
YGSSALSFGSFIEREVLTKGVSSPTNSLRMRIGVRASSDQMRANPALGLI
SLPPRPTKSVIAAMAPVVDELSKLLTKLNMSKFRQRFDVIKVDYDTLKMM
TKEEEFSVLGIPLGPRIKLMNELGIKRSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf