prot_H-elongata_contig180139.4792.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig180139.4792.1
Unique Nameprot_H-elongata_contig180139.4792.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5KVH0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.240e-15
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DMMF++RRL  L R+K+IPLY+ CF+ + KA DSVDQ +LW
Sbjct:   62 ILPEEQCGFRPGRSTVDMMFVVRRLQELGRRKKIPLYL-CFVDLNKAYDSVDQEMLW 117          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5KQ53_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ53_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 7.400e-15
Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ LLW
Sbjct:   42 ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYM-CFVDLNKAYDSVDRQLLW 97          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5KLC1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.640e-14
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ +LW
Sbjct:  108 ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYM-CFVDLNKAYDSVDREMLW 163          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5JSW8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.730e-14
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ +LW
Sbjct:  104 ILPEEQCGFRPGRSTVDMLFVLRRLQELGRRKKIPLYM-CFVDLNKAYDSVDREMLW 159          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5KWL9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 3.780e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST  M+F++RRL  L R++RIPLY+ CFI + KA DSVD+ LLW
Sbjct:   31 ILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYM-CFIDLQKAYDSVDRELLW 86          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5KZG0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG0_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.810e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST  M+F++RRL  L R++RIPLY+ CFI + KA DSVD+ LLW
Sbjct:   55 ILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYM-CFIDLQKAYDSVDRELLW 110          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5J7A9_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.020e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ +LW
Sbjct:  190 ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYM-CFVDLNKAYDSVDREMLW 245          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5LQV6_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQV6_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.110e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ +LW
Sbjct:  237 ILPEEQGGFRPGRSTVDMLFVVRRLQELGRRKKIPLYM-CFVDLNKAYDSVDREMLW 292          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5JVE1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.140e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY+ CF+ + KA DSVD+ +LW
Sbjct:   79 ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYM-CFVDLNKAYDSVDREMLW 134          
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Match: A0A6H5K3W9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W9_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.180e-13
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDSVDQTLLW 57
            ILPE+  GFR   ST DM+F++RRL  L R+K+IPLY  CF+ + KA DSVD+ +LW
Sbjct:  127 ILPEEQCGFRPGRSTVDMLFVVRRLQELGRRKKIPLYT-CFVDLNKAYDSVDREMLW 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180139.4792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVH0_9PHAE2.240e-1559.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ53_9PHAE7.400e-1557.89Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KLC1_9PHAE1.640e-1456.14Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JSW8_9PHAE3.730e-1456.14Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KWL9_9PHAE3.780e-1457.89Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KZG0_9PHAE6.810e-1457.89Reverse transcriptase domain-containing protein (F... [more]
A0A6H5J7A9_9PHAE1.020e-1356.14Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LQV6_9PHAE1.110e-1356.14Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JVE1_9PHAE1.140e-1356.14Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K3W9_9PHAE1.180e-1356.14Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig180139contigH-elongata_contig180139:13..183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig180139.4792.1mRNA_H-elongata_contig180139.4792.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig180139 13..183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig180139.4792.1 ID=prot_H-elongata_contig180139.4792.1|Name=mRNA_H-elongata_contig180139.4792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
ILPEKHSGFRLNHSTTDMMFMIRRLHGLARKKRIPLYVVCFIGITKACDS
VDQTLLW
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