prot_H-elongata_contig18006.4788.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18006.4788.1
Unique Nameprot_H-elongata_contig18006.4788.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: D7G7Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z9_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.150e-21
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    2 QVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            +VGEV KLAP SLADIAKEIATDADKFTISFPQDLKVETKATAL++LL+VDLLFFE
Sbjct:  462 RVGEVKKLAPSSLADIAKEIATDADKFTISFPQDLKVETKATALVSLLLVDLLFFE 517          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A6H5JM82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM82_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.760e-12
Identity = 34/39 (87.18%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    2 QVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVET 40
            +VGEV KLAP SLADIAKEIATDADKFTISFPQDLK  T
Sbjct:  571 RVGEVKKLAPSSLADIAKEIATDADKFTISFPQDLKART 609          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A7S2V2C3_9STRA (Phospholipid scramblase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.970e-10
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    2 QVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            ++G V K+ P   + +A+E  TDAD F + FP+DLKVETKAT L A++++D +FFE
Sbjct:  197 EIGNVVKVKPNGCSGLAREAFTDADNFNVDFPKDLKVETKATILGAMMLIDFMFFE 252          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A267DTL2_9PLAT (Phospholipid scramblase n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DTL2_9PLAT)

HSP 1 Score: 54.3 bits (129), Expect = 3.450e-7
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 DQVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            D+  EV +L  +  A  AKEI TDAD F +  PQD+ VETKAT + A+L++D +FFE
Sbjct:  160 DETHEVGRLHKE-WAGFAKEILTDADTFLLEVPQDMAVETKATLVAAVLLIDFMFFE 215          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A1E7FMS7_9STRA (Phospholipid scramblase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMS7_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.240e-6
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    2 QVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            ++G++ K  P  LA++AKE+ATDAD FT+  P  +K + K   L AL ++D +FFE
Sbjct:  209 KLGKIVKEKPDGLANLAKELATDADNFTMHVPPTMKPQEKGVMLAALHLIDYMFFE 264          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A7S0CC20_9STRA (Phospholipid scramblase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CC20_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.560e-6
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 DQVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            + +G++ K AP+ + D  KE+ATDAD FT+  P++L  + KA  L AL ++D +FFE
Sbjct:  197 EYMGKIVKEAPEGIGDALKELATDADNFTMYVPKELDPKKKAAMLGALHLIDYMFFE 253          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A2G8KQD7_STIJA (Phospholipid scramblase n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KQD7_STIJA)

HSP 1 Score: 49.3 bits (116), Expect = 1.460e-5
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    1 DQVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            D+  E+ K+  Q  A   +E+ T AD F+I FP DL+V+TKA  + A+L++D +FFE
Sbjct:  101 DETEEIGKITKQ-WAGYVQEVFTKADNFSIQFPMDLEVKTKAILIGAVLLIDFMFFE 156          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A835Z4E1_9STRA (Scramblase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E1_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 2.260e-5
Identity = 20/46 (43.48%), Postives = 34/46 (73.91%), Query Frame = 0
Query:   12 QSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            + + ++ ++  +DAD F I+FPQDLKVETKA+ +  + ++D +FFE
Sbjct:  741 KGIGEVLRKAVSDADNFNITFPQDLKVETKASVIATMFLLDFMFFE 786          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A6A4VMK1_AMPAM (Phospholipid scramblase n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VMK1_AMPAM)

HSP 1 Score: 48.5 bits (114), Expect = 4.700e-5
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 DQVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            D   EV  +  Q  + + +E+ TD+D F++SFP DL V  KAT L ALL+VD +FFE
Sbjct:  177 DDEQEVGSIRKQ-WSGVLREMVTDSDTFSVSFPIDLDVSLKATLLGALLLVDFMFFE 232          
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Match: A0A3M7SNC1_BRAPC (Phospholipid scramblase n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7SNC1_BRAPC)

HSP 1 Score: 48.5 bits (114), Expect = 4.910e-5
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    2 QVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLVVDLLFFE 57
            QVG+++K+     A  AKE+ T AD F+I+FP DL V+TKA  + AL ++D  +FE
Sbjct:  193 QVGKLSKV----YAGFAKEMFTQADNFSINFPTDLSVKTKAALIGALFLIDFTYFE 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18006.4788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G7Z9_ECTSI1.150e-2189.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM82_9PHAE6.760e-1287.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2V2C3_9STRA5.970e-1050.00Phospholipid scramblase n=1 Tax=Fibrocapsa japonic... [more]
A0A267DTL2_9PLAT3.450e-750.88Phospholipid scramblase n=2 Tax=Macrostomum lignan... [more]
A0A1E7FMS7_9STRA3.240e-644.64Phospholipid scramblase n=1 Tax=Fragilariopsis cyl... [more]
A0A7S0CC20_9STRA4.560e-643.86Phospholipid scramblase n=1 Tax=Proboscia inermis ... [more]
A0A2G8KQD7_STIJA1.460e-543.86Phospholipid scramblase n=1 Tax=Stichopus japonicu... [more]
A0A835Z4E1_9STRA2.260e-543.48Scramblase-domain-containing protein n=1 Tax=Tribo... [more]
A0A6A4VMK1_AMPAM4.700e-547.37Phospholipid scramblase n=2 Tax=Amphibalanus amphi... [more]
A0A3M7SNC1_BRAPC4.910e-546.43Phospholipid scramblase n=1 Tax=Brachionus plicati... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005552ScramblasePFAMPF03803Scramblasecoord: 17..57
e-value: 1.0E-8
score: 34.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..59
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 60..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18006contigH-elongata_contig18006:294..844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18006.4788.1mRNA_H-elongata_contig18006.4788.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18006 294..844 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18006.4788.1 ID=prot_H-elongata_contig18006.4788.1|Name=mRNA_H-elongata_contig18006.4788.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
DQVGEVNKLAPQSLADIAKEIATDADKFTISFPQDLKVETKATALMALLV
VDLLFFEVII*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005552Scramblase