prot_H-elongata_contig179262.4750.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179262.4750.1
Unique Nameprot_H-elongata_contig179262.4750.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A6H5L470_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L470_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.070e-9
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQV-GDQ 38
            MVCALDLLSGMSEGLG  F SLLASSNLLQLLLQ  GD+
Sbjct:  644 MVCALDLLSGMSEGLGGSFGSLLASSNLLQLLLQCCGDE 682          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: S8D2G4_9LAMI (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D2G4_9LAMI)

HSP 1 Score: 48.1 bits (113), Expect = 3.580e-5
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGSE +SL+  SNL +LLLQ
Sbjct:  647 IVCSLDLLSGLAEGLGSEIESLVLRSNLRELLLQ 680          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A438K3Z1_VITVI (Transportin-1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K3Z1_VITVI)

HSP 1 Score: 46.2 bits (108), Expect = 4.640e-5
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL A SNL  LLLQ
Sbjct:   37 IVCSLDLLSGLAEGLGSGIESLAAQSNLRDLLLQ 70          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A8J5HVS4_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5HVS4_ZINOF)

HSP 1 Score: 47.8 bits (112), Expect = 4.900e-5
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL+A+SNL  LLLQ
Sbjct:  429 IVCSLDLLSGLAEGLGSSVESLVATSNLRDLLLQ 462          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A8J5LY86_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LY86_ZINOF)

HSP 1 Score: 47.8 bits (112), Expect = 4.900e-5
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL+A+SNL  LLLQ
Sbjct:  151 IVCSLDLLSGLAEGLGSSVESLVATSNLRDLLLQ 184          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: UPI000900A194 (transportin-1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000900A194)

HSP 1 Score: 47.4 bits (111), Expect = 6.710e-5
Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL++ SNL  LLLQ
Sbjct:  634 IVCSLDLLSGLAEGLGSSIESLISQSNLTDLLLQ 667          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A835HKW0_9MAGN (Importin N-terminal domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HKW0_9MAGN)

HSP 1 Score: 47.0 bits (110), Expect = 9.180e-5
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL+A SNL  LLLQ
Sbjct:  674 IVCSLDLLSGLAEGLGSGIESLVAQSNLRDLLLQ 707          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A200QZR5_9MAGN (HEAT n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QZR5_9MAGN)

HSP 1 Score: 47.0 bits (110), Expect = 9.180e-5
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL+A SNL  LLLQ
Sbjct:  629 IVCSLDLLSGLAEGLGSGIESLVAQSNLRDLLLQ 662          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: A0A6I9QLY3_ELAGV (transportin-1 n=7 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QLY3_ELAGV)

HSP 1 Score: 47.0 bits (110), Expect = 9.180e-5
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL+A SNL  LLLQ
Sbjct:  637 IVCSLDLLSGLAEGLGSGIESLVAQSNLRDLLLQ 670          
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Match: W9QIW5_9ROSA (Importin N-terminal domain-containing protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9QIW5_9ROSA)

HSP 1 Score: 47.0 bits (110), Expect = 9.180e-5
Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQ 34
            +VC+LDLLSG++EGLGS  +SL++ SNL+ LLLQ
Sbjct:  638 IVCSLDLLSGLAEGLGSGIESLVSKSNLVDLLLQ 671          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179262.4750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5L470_9PHAE4.070e-984.62Importin N-terminal domain-containing protein n=2 ... [more]
S8D2G4_9LAMI3.580e-567.65Importin N-terminal domain-containing protein (Fra... [more]
A0A438K3Z1_VITVI4.640e-567.65Transportin-1 n=1 Tax=Vitis vinifera TaxID=29760 R... [more]
A0A8J5HVS4_ZINOF4.900e-567.65Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
A0A8J5LY86_ZINOF4.900e-567.65Uncharacterized protein n=1 Tax=Zingiber officinal... [more]
UPI000900A1946.710e-564.71transportin-1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI... [more]
A0A835HKW0_9MAGN9.180e-567.65Importin N-terminal domain-containing protein n=1 ... [more]
A0A200QZR5_9MAGN9.180e-567.65HEAT n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0... [more]
A0A6I9QLY3_ELAGV9.180e-567.65transportin-1 n=7 Tax=Arecaceae TaxID=4710 RepID=A... [more]
W9QIW5_9ROSA9.180e-564.71Importin N-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..41
e-value: 1.1E-7
score: 32.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179262contigH-elongata_contig179262:1102..1230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179262.4750.1mRNA_H-elongata_contig179262.4750.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179262 1090..1230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179262.4750.1 ID=prot_H-elongata_contig179262.4750.1|Name=mRNA_H-elongata_contig179262.4750.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MVCALDLLSGMSEGLGSEFQSLLASSNLLQLLLQVGDQYTKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like