prot_H-elongata_contig179052.4737.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179052.4737.1
Unique Nameprot_H-elongata_contig179052.4737.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length290
Homology
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 342 bits (877), Expect = 8.370e-106
Identity = 185/294 (62.93%), Postives = 219/294 (74.49%), Query Frame = 0
Query:    1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVG-----QVIPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIP-VGAAGEVI--VSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVG 284
            M+ AL R+KRHKSPG+DG+PAD  +LA G+E   SPMGK ++ ++      +VIP    ESTVV IPKKGD+TDMNN+RGISLM T LKVL+++IS RL++A ER  LFS +QAGFR +EEC TQ ACLLEI +RRK R K +YL FVDLKKAYDTVP EAL AKL +YGVRG ML FI ALYAN KIAVR    +SD  +L RGVRQGCPLSP+LFNIFIND+LDGA  LG+P VG   E    + GLLFADDLV   PTR KL  M +H++ W+ ENEM  GI KCGV  +G
Sbjct:  505 MVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIG 798          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 245 bits (625), Expect = 1.410e-70
Identity = 132/297 (44.44%), Postives = 180/297 (60.61%), Query Frame = 0
Query:    4 ALNRLKRHKSPGSDGIPADVYKLAIGDEISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVR---CRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVI-------VSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGK 285
            AL RL  +K+ G DGI A+  KLAI    SP GK+L+ ++  +     +P  W  S VVSI KKGD+T M+NYRGIS+MG  +K+LM +++ RL    +   L    Q GF   EEC  QVA + +I  RR+  G P+Y  F+DL+KAYDT+PHE L +KL+  G+ G ML F+ ALY +  + V+     G +SDP+ + RG+RQGCP SP+LFNIFIND+ DG   LG  V    +++       V G LFADD V   P+   L  M  H + W E++ M  G+KKCGV  +G+
Sbjct:  405 ALKRLNNNKASGVDGITAETLKLAIYAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGR 701          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 222 bits (565), Expect = 7.490e-63
Identity = 122/289 (42.21%), Postives = 171/289 (59.17%), Query Frame = 0
Query:    1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDEI--SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTV 282
            +L AL    + K+ G+DGIP + YK+   D+   SP G  +  ++ ++     +P+ W E+ +V +PKKGDL +M+NYRGISL+ T  K ++ +I+ +L+       +    QAGFR+ EEC  Q  C  EI KRR ++GKP+   F+D KKAYD VPHE L AKL  YG  GR+L F+  LY N K +VR     SD      GV+QGCP SP LFN++IN++L+G   +GI  G      V GLLFADD V    +   +V  ME L  W ++ +M + I KCG+ V
Sbjct:  216 VLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGIGNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMV 500          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 220 bits (560), Expect = 1.460e-61
Identity = 128/308 (41.56%), Postives = 180/308 (58.44%), Query Frame = 0
Query:    1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVV-----GQVIPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV-----------TVVGKKMTAV 290
            +  AL     +KSPGSDGIP++V+K+   ++   SP+ K ++ ++      + IP     S V+ IPKKGD+ D NNYRGISL+ T  KVL  +I+ RL     +  + +  QAGFR +EEC  Q   L E+ +RRKI G  +++ F+D  KAYD VPHEALL K+   G+ G++   I ALY + K+ VR    +S  V    GVRQGCP SP+LF+I+IND+LDG   + IP     E  + GLLFADD V    +  +L   +E LT W ++ EMQ+   KCG+           T++GK +T V
Sbjct:  398 ICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP---GIEECIPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGMLFTIMGKPITQV 702          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 220 bits (561), Expect = 1.680e-61
Identity = 123/285 (43.16%), Postives = 176/285 (61.75%), Query Frame = 0
Query:    4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI---SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
            AL     +KSPGSDGIP++V+KL + +EI   SP+ K +  ++ ++     +P     S VV IPKKGD+ D NNYRGISL+ T  KV+  +++ RL A   +  + +  QAGFR +EEC  Q   L E+ +RRKI G  +++ F+D  KAYD VPH+ALL K+   G+  ++   I ALY + K+ VR  G +S  V    GVRQGCP SPLLF+I+IND+L G   + IP     E ++SGLLFADD V    +  +L   +E ++ W ++ EMQ+  +KCG+
Sbjct:  639 ALKTTPNNKSPGSDGIPSEVWKL-VQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP---GTEAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGI 919          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 220 bits (561), Expect = 1.820e-61
Identity = 128/287 (44.60%), Postives = 171/287 (59.58%), Query Frame = 0
Query:    1 MLGALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
            +  AL     +KSPGSDGIP++V+KL   +E   SP  K    +V ++     IP     S +V IPKKGD+ D NNYRGISL+ T  KVL  +I+ RLS    +  +    QAGFR +EEC  Q   L E+ +RRKI G  +++ F+D  KAYD VPH+ALL K+   G+ G++   I ALY + K+ VR    +S  V    GVRQGCP SPLLF+IFIND+LDG   + +P G   E+   GLLFADD V    +  +L   +E LT W  + EMQ+  +KCG+
Sbjct: 1084 ICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIKGVKVP-GIDTEI--PGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGI 1367          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: L7JRS9_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JRS9_TRAHO)

HSP 1 Score: 216 bits (549), Expect = 3.260e-61
Identity = 120/292 (41.10%), Postives = 172/292 (58.90%), Query Frame = 0
Query:    5 LNRLKRHKSPGSDGIPADVYKLAIGD-EIS-PMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGKKMTA 289
            L  ++R K+PG DGIP D YK A  D E+  P+ + L  ++ +      IPD W E+ +V IPKKGD++  +NYRGISL+ T  K+   +++ R+S   E   +    QAGFRR EEC  Q   L+EI KRR++ G+ +Y+ F+D  KAYD VPH ALL K+   G+ G++LGF  ALY + + +VR     S+      GV+QGCP SP+LFNI+IND+ +G + + +  GA     + GLLFADD V    +   L   +  L  W  + +M+V I KCG  + G +  A
Sbjct:   21 LKSVRRGKAPGVDGIPYDFYKCAQDDIELEHPLSRTLYLLIHRSFMTGKIPDRWNEAIIVPIPKKGDMSRTDNYRGISLINTVCKIATKIVAERISRICEANNILINEQAGFRRLEECVAQATSLVEILKRRELEGQTTYVVFIDFTKAYDRVPHGALLHKMKMLGLNGKLLGFTEALYRSPRASVRVGEDTSECFEYQIGVKQGCPASPILFNIYINDLFEGLSGIELEPGAKP---IPGLLFADDAVILAESLAALESDVRKLEEWCNKWKMRVNIDKCGFMIFGDETVA 309          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG)

HSP 1 Score: 214 bits (545), Expect = 1.760e-60
Identity = 120/284 (42.25%), Postives = 169/284 (59.51%), Query Frame = 0
Query:    4 ALNRLKRHKSPGSDGIPADVYKLAIGDE--ISPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV 280
            AL     +KSPGSDGIP++V+KL   ++   SP  K    ++  +     +P     S VV IPKKGD+ D NNYRGISL+ T  KV+  +++ RL A   +  + +  QAGFR +EEC  Q   L E+ +RRKI G  +++ F+D  KAYD VPH+ALL K+   G+  ++   I ALY + K+ VR    +S  V    GVRQGCP SPLLF+I+IND+L G   + IP     E  +SGLLFADD V    +  +L   +E ++ W ++ EMQ+  +KCG+
Sbjct:  313 ALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP---GTEATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGI 593          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 215 bits (548), Expect = 5.340e-60
Identity = 129/290 (44.48%), Postives = 173/290 (59.66%), Query Frame = 0
Query:    4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI--SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGKK 286
            ALN    +K+PG DGIP++V+K    +EI  S + K L  VV ++     IP+    S VV IPKKGDL D NNYRGISL+ T +K++  + + +LS    +  +    QAGFR +EEC  Q   L EI +RRKI+G P+++ F+D  KAYD VPH+ALL KL   G+ G +   I ALY + KI VR    +S  V    GVRQGCP SP+LF+++IND+ +     GI V   GE I  GLLFADD V    +  KL    E ++ W ++ EMQV   KCGV  +G +
Sbjct:  358 ALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIK--GITVPEIGEKI-KGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQ 644          
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Match: A0A1R1YJD8_9FUNG (LINE-1 retrotransposable element ORF2 protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YJD8_9FUNG)

HSP 1 Score: 215 bits (547), Expect = 1.210e-59
Identity = 128/306 (41.83%), Postives = 178/306 (58.17%), Query Frame = 0
Query:    4 ALNRLKRHKSPGSDGIPADVYKLAIGDEI---SPMGKALMAVVGQV-----IPDVWMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREGLFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTVPHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVRQGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVPTRRKLVGMMEHLTTWLEENEMQVGIKKCGV-----------TVVGKKMTAV 290
            AL      KSPG DGIP++ +K  +  EI   SP+ K L  ++ ++     IP+    S VV IPKKGD+ + NNYRGISL+ T  KV+  +I+ RL     +  + +  QAGFR +EEC  Q   L E+ +RRKI G  +++ F+D  KAYD VPHEALL K+   G+ G++   I ALY + K+ VR  G +S  V    GVRQGCP SP+LF+I+IND+LDG   + +P     E ++ GLLFADD V    +  +L   +E L+ W  + EMQ+  +KCGV           TV+GK +  V
Sbjct:  775 ALKSTPNKKSPGYDGIPSEAWK-TVQHEIEPTSPLAKVLFRLIKEIWDNESIPEQLDPSVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIARRLCKIENKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRACGIGGKVYRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKVP---GVEEVIPGLLFADDAVVLAESPAELQIALEKLSAWSNKWEMQINQEKCGVMGINGNTGMLFTVMGKPINQV 1076          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179052.4737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE8.370e-10662.93Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO1.410e-7044.44Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
L7JX89_TRAHO7.490e-6342.21RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1Y7R2_9FUNG1.460e-6141.56Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1X7T5_9FUNG1.680e-6143.16RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YP44_9FUNG1.820e-6144.60LINE-1 retrotransposable element ORF2 protein (Fra... [more]
L7JRS9_TRAHO3.260e-6141.10RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1YD24_9FUNG1.760e-6042.25RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R0GP03_9FUNG5.340e-6044.48RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YJD8_9FUNG1.210e-5941.83LINE-1 retrotransposable element ORF2 protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 59..282
e-value: 1.7E-41
score: 142.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 40..290
score: 17.116
NoneNo IPR availablePANTHERPTHR19446:SF425coord: 4..277
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 4..277
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 4..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179052contigH-elongata_contig179052:157..1041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179052.4737.1mRNA_H-elongata_contig179052.4737.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179052 145..1041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179052.4737.1 ID=prot_H-elongata_contig179052.4737.1|Name=mRNA_H-elongata_contig179052.4737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=290bp
MLGALNRLKRHKSPGSDGIPADVYKLAIGDEISPMGKALMAVVGQVIPDV
WMESTVVSIPKKGDLTDMNNYRGISLMGTGLKVLMVLISLRLSAAMEREG
LFSPAQAGFRRQEECATQVACLLEITKRRKIRGKPSYLAFVDLKKAYDTV
PHEALLAKLDYYGVRGRMLGFIWALYANRKIAVRCRGGMSDPVALARGVR
QGCPLSPLLFNIFINDVLDGAAELGIPVGAAGEVIVSGLLFADDLVCTVP
TRRKLVGMMEHLTTWLEENEMQVGIKKCGVTVVGKKMTAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom