prot_H-elongata_contig17905.4736.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17905.4736.1
Unique Nameprot_H-elongata_contig17905.4736.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Match: D7FIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ0_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 1.230e-100
Identity = 162/216 (75.00%), Postives = 189/216 (87.50%), Query Frame = 0
Query:    1 QNGLAFLFSSAAVATSTASPALSDDETD-LDDDSKQKIVQALKEALQGIGELGVDTAGEDERSSTPKDVLNASSDVLPNRTPFEMQYELFKRGMELEDDDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQ-DRNMAMARTFYESALADYDHAVVLDPQ 214
            +NGLA L  S AVA+  ASPA+++ ++D LD+++KQKI QAL EAL+G+  + +   G     +  KDVL ASSDVLPNR+PFEMQYELFKRGMELEDDD+FVGAE+QWTEIIENFNSPNFRAT+PGNK LLARAYSNRGNTRLSLQKTREAILDYSESIDL+PEKGEFW+ARGVA+EDMADRK++A+ DRN+ +ARTFYESALADYDHAVVLDPQ
Sbjct:   72 KNGLALLVGSVAVAS--ASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGG----GAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQ 281          
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Match: A0A6H5JBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBX7_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 5.530e-97
Identity = 159/216 (73.61%), Postives = 188/216 (87.04%), Query Frame = 0
Query:    1 QNGLAFLFSSAAVATSTASPALSDDETD-LDDDSKQKIVQALKEALQGIGELGVDTAGEDERSSTPKDVLNASSDVLPNRTPFEMQYELFKRGMELEDDDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQ-DRNMAMARTFYESALADYDHAVVLDPQ 214
            +NGL+ L  S AVA+  ASPA+++ ++D LD+++KQKI QAL EAL+G+  + +   G     +  K+VL ASSDVLPNR+PFEMQYELFKRGMEL+D D+FVGAE+QWTEIIENFNSPNFRATSPGNK LLARAYSNRGNTRLSLQKTREAILDYSESIDL+PEKGEFW+ARGVA+EDMADRK++A+ DRN+ +ARTFYESALADYDHAVVLDPQ
Sbjct:   73 KNGLSLLVGSVAVAS--ASPAVAETDSDELDEETKQKITQALMEALEGMEGVELTPGG----GAQSKEVLKASSDVLPNRSPFEMQYELFKRGMELQDADDFVGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQ 282          
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Match: A0A835Z1G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G2_9STRA)

HSP 1 Score: 167 bits (424), Expect = 5.090e-47
Identity = 84/151 (55.63%), Postives = 109/151 (72.19%), Query Frame = 0
Query:   75 VLPNRTPFEMQYELFKRGMELEDDDNFVGAEKQWTE------------IIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQDRNMAMARTFYESALADYDHAVVLDP 213
             LPNR+PFE+QYE+FK GMELE D++FV AEKQWTE            IIE   +P +R +S GN++LLARA++NRG  R SL + REAILDYSE++ L+P+K EFW++RG+AYE +AD K+     +    R FYESAL+DYD A+VLDP
Sbjct:   30 TLPNRSPFELQYEMFKNGMELEGDEDFVAAEKQWTEVNLLSTLHDSLQIIEELETPAWRESSTGNRYLLARAHANRGGARASLGRQREAILDYSEALTLVPDKCEFWLSRGLAYEGLADMKVAMDGCSQEGVRVFYESALSDYDGALVLDP 180          
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Match: W7TS28_9STRA (Tetratricopeptide tpr_1 repeat-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS28_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.180e-24
Identity = 57/132 (43.18%), Postives = 92/132 (69.70%), Query Frame = 0
Query:   83 EMQYELFKRGMELEDDDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQDRNMAMARTFYESALADYDHAVVLDPQ 214
            E+++E+ K+G++L     F  AE  +TE+I  F+S ++ + S   K L+A+A+SNRGN R SL +  EA+LDYS SI+L P+  E+W  RG+A+E +AD  +  ++++   A  FYE+A+ADY+HA+V+DP+
Sbjct:  137 ELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDS-DYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKD---AFQFYETAIADYEHALVMDPE 264          
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Match: A0A0G4F1G1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1G1_VITBC)

HSP 1 Score: 101 bits (251), Expect = 1.490e-21
Identity = 59/163 (36.20%), Postives = 98/163 (60.12%), Query Frame = 0
Query:   60 ERSSTPKDVLNASSDVL----PNRTP-----FEMQYELFKRGMELEDDDNFVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTREAILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQDRNMAMARTFYESALADYDHAVVLDP 213
            E++  P D    S  V     P  +P     F+ QY LFK G+E     +F  AE  +TEII+++ +P  + +    +F+LARAY++RGNTR+SL +  +A++DYS +I+  P++ +FW+ R +A E  A++ + +   ++  A  +Y+ AL DY+HA+VL P
Sbjct:  107 EQTQQPVDTTKPSRTVELLGGPGASPGRLSEFQRQYSLFKAGLEETAKFDFKEAEGIFTEIIDSYETPKAKESERA-RFMLARAYTDRGNTRVSLGELNKALVDYSCAIEYAPDEADFWLNRAIACEQKAEQSLTS---SLQFANQWYKEALEDYEHALVLKP 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17905.4736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FIQ0_ECTSI1.230e-10075.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBX7_9PHAE5.530e-9773.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1G2_9STRA5.090e-4755.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TS28_9STRA1.180e-2443.18Tetratricopeptide tpr_1 repeat-containing protein ... [more]
A0A0G4F1G1_VITBC1.490e-2136.20Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 132..165
e-value: 0.0057
score: 25.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 132..165
score: 9.381
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 78..214
e-value: 5.0E-14
score: 54.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 86..214
NoneNo IPR availablePANTHERPTHR44858:SF8coord: 44..192
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 44..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.504
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 132..165
score: 9.867

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17905contigH-elongata_contig17905:255..1287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17905.4736.1mRNA_H-elongata_contig17905.4736.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17905 255..1287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17905.4736.1 ID=prot_H-elongata_contig17905.4736.1|Name=mRNA_H-elongata_contig17905.4736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
QNGLAFLFSSAAVATSTASPALSDDETDLDDDSKQKIVQALKEALQGIGE
LGVDTAGEDERSSTPKDVLNASSDVLPNRTPFEMQYELFKRGMELEDDDN
FVGAEKQWTEIIENFNSPNFRATSPGNKFLLARAYSNRGNTRLSLQKTRE
AILDYSESIDLMPEKGEFWMARGVAYEDMADRKIMAQDRNMAMARTFYES
ALADYDHAVVLDPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom