prot_H-elongata_contig179014.4734.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179014.4734.1
Unique Nameprot_H-elongata_contig179014.4734.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: D8LKZ5_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ5_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 9.660e-18
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GR VR+PRAVKG RV  MTF ELCG ALGAADY A+SEAFHT+F+ GVP M L
Sbjct:  336 GRSVRIPRAVKGGRVAMMTFDELCGKALGAADYTAISEAFHTLFVHGVPMMNL 388          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A7S2SSF0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSF0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.740e-12
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GREV++PRA    RV R +F ELCG A+GAADY+A+  AF T+FI  +P++TL
Sbjct:  363 GREVQIPRASLSTRVARFSFLELCGKAVGAADYIAIGSAFPTVFIEDIPRLTL 415          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A812KC57_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812KC57_SYMPI)

HSP 1 Score: 64.7 bits (156), Expect = 6.760e-12
Identity = 25/53 (47.17%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GR++ +PR  +G++V    F +LC  ALGAADY+A+  AFHT+F++ +PK+T+
Sbjct:    6 GRKIGIPRCAEGSKVAWFEFSDLCNKALGAADYLAIGRAFHTVFLADIPKLTM 58          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A1Q9E416_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E416_SYMMI)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GR+V VPR  + + V   TF +LC  ALGAADY+A+  AFHT+FIS +P++T+
Sbjct:  895 GRKVNVPRCAENSDVAWFTFSDLCNQALGAADYLAVGNAFHTVFISNIPRLTM 947          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A836C7Q8_9STRA (AFG1-like ATPase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.830e-11
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            G +V VP AV   R+ R TF ELCG  LGAADY A++ AFHT+FI+ VP+MTL
Sbjct:  343 GHDVAVPCAVIAARMARFTFAELCGLPLGAADYGAVAAAFHTVFITRVPRMTL 395          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A7S0HW54_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HW54_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 6.120e-11
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GRE+ VP A +   V R +F ELCG  LGAADY+ ++ AFHT+F++ +P+ TL
Sbjct:  114 GREIPVPSAGRSTAVARFSFTELCGRPLGAADYLGIAAAFHTVFLTDIPRFTL 166          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A7S3JPQ8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPQ8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.960e-11
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GREV VPRA    R    TF +LCGSALGAADY+A+++A H +F+ GVP M L
Sbjct:  293 GREVHVPRADLACRAGYFTFDQLCGSALGAADYLAIAQALHVVFVDGVPIMDL 345          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A8J5XKK8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKK8_DIALT)

HSP 1 Score: 63.5 bits (153), Expect = 2.030e-10
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMT 52
            GRE+ VPRA     V R  F ELC   LGA D++A++ AFHT+F+SGVP+MT
Sbjct:  309 GRELHVPRASPHAAVARFDFDELCARPLGAEDFLALAAAFHTLFVSGVPRMT 360          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A0A812PMG7_9DINO (Calmodulin n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812PMG7_9DINO)

HSP 1 Score: 63.2 bits (152), Expect = 2.780e-10
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMTL 53
            GR+V VPR  + + +    F +LC  ALGAADY+A+  AFHT+FIS +P++T+
Sbjct:  291 GRKVNVPRCAENSGIAWFAFSDLCDQALGAADYLAIGNAFHTVFISNIPRLTM 343          
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Match: A9TTK9_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TTK9_PHYPA)

HSP 1 Score: 62.8 bits (151), Expect = 3.230e-10
Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    2 REVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPKMT 52
            R + VP+A  G  V   TF+ELCG+A GAADY+A++ +FHT+FISG+P++T
Sbjct:  252 RTIEVPKAAGG--VAAFTFKELCGAAKGAADYLAIASSFHTVFISGIPRLT 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179014.4734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKZ5_ECTSI9.660e-1873.58EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2SSF0_9STRA4.740e-1256.60Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A812KC57_SYMPI6.760e-1247.17Hypothetical protein n=1 Tax=Symbiodinium pilosum ... [more]
A0A1Q9E416_SYMMI3.140e-1152.83Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
A0A836C7Q8_9STRA5.830e-1160.38AFG1-like ATPase-domain-containing protein n=1 Tax... [more]
A0A7S0HW54_9EUKA6.120e-1150.94Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S3JPQ8_9STRA7.960e-1158.49Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A8J5XKK8_DIALT2.030e-1055.77Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A812PMG7_9DINO2.780e-1049.06Calmodulin n=1 Tax=Symbiodinium natans TaxID=87847... [more]
A9TTK9_PHYPA3.230e-1054.90Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005654ATPase, AFG1-likePFAMPF03969AFG1_ATPasecoord: 2..52
e-value: 2.5E-10
score: 39.8
IPR005654ATPase, AFG1-likePANTHERPTHR12169ATPASE N2Bcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179014contigH-elongata_contig179014:670..828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179014.4734.1mRNA_H-elongata_contig179014.4734.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179014 670..828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179014.4734.1 ID=prot_H-elongata_contig179014.4734.1|Name=mRNA_H-elongata_contig179014.4734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
GREVRVPRAVKGNRVVRMTFQELCGSALGAADYVAMSEAFHTIFISGVPK
MTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005654ATPase_AFG1-like