prot_H-elongata_contig179004.4733.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig179004.4733.1
Unique Nameprot_H-elongata_contig179004.4733.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length201
Homology
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM)

HSP 1 Score: 150 bits (380), Expect = 3.600e-41
Identity = 77/195 (39.49%), Postives = 119/195 (61.03%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTK-TSIILSVAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            + RDR+   L+  Q QYI  + ERF ++  T++   +  G  LSK  +P+   E+  M+ +PYR++VG L++ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY  +P      + + DAD+G   D RRS SG  V M  GAISW SR+Q +   + +E+EY++  +   E+ +LR +
Sbjct:   38 VERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWLRNL 232          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A146HBL6_MYCCL (Uncharacterized protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HBL6_MYCCL)

HSP 1 Score: 147 bits (371), Expect = 3.440e-40
Identity = 80/202 (39.60%), Postives = 123/202 (60.89%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTKTS-IILSVAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNE-LHFLRQIKEFITP 200
            + RDR   TLT  Q  Y+  + E+FG+T    I + +A  + LS  + P  DA   +M+++PYRE++G L+W +T TRPD++F    L++F  NPG  HW AA++ LQYL  TR LG+T+GG   +   L+ + DAD G   + R+++SG    + G AISW SR Q++TA +++E+EY+++     E L F + I E   P
Sbjct:    3 VRRDRKRRTLTLTQSTYVDALMEKFGMTDAKPISVPLAPDQNLSVEQCPTDDATKLQMKKLPYRELIGALVWLSTATRPDLAFTVAVLSRFVSNPGRAHWDAAKRTLQYLKGTRTLGLTFGGSETK-FGLNIFADAD-GMSMENRKAISGYVFTLNGAAISWSSRQQEITALSMTEAEYISITYCAKEALWFRKFIGELFGP 202          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM)

HSP 1 Score: 151 bits (381), Expect = 1.340e-39
Identity = 77/195 (39.49%), Postives = 120/195 (61.54%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTK-TSIILSVAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            + RDR+   L+  Q QYI  + ERF ++  T++   +  G  LSK  +P+   E+  M+ +PYR++VG L++ A  TRPDIS+A   LA+F+ NPGP+HW+AA+   +YL  T+D+ +TY  +P      + + DAD+G   D RRS SG  V M  GAISW SR+Q +   + +E+EY++  +   E+ +LR +
Sbjct:  255 VERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWLRNL 449          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM)

HSP 1 Score: 150 bits (379), Expect = 6.540e-39
Identity = 77/195 (39.49%), Postives = 119/195 (61.03%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTK-TSIILSVAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            + RDR+   L+  Q QYI  + ERF ++  T++   +  G  LSK  +P+   E+  M+ +PYR++VG L++ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY  +P      + + DAD+G   D RRS SG  V M  GAISW SR+Q +   + +E+EY++  +   E+ +LR +
Sbjct:  344 VERDRSKCLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWLRNL 538          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI)

HSP 1 Score: 143 bits (361), Expect = 1.300e-38
Identity = 80/194 (41.24%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIILS-VAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQ 193
            I+RD  AGT +  QH YI  +  RF  T    + + +   + LSK + P++ AEV  MR++PYRE +GVL++AA  T+PDI FA   LA+F  NPG  HW A ++  +YL  TR L   YGGE     +L  +VDAD G   + RR+++G   ++ GGA+SW S+ Q++   + +ESEYVA      E  +LR+
Sbjct:   15 ISRDLEAGTFSLSQHAYIDALLARFNFTDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYAALGTQPDIVFAVSTLAQFAQNPGQPHWDAVKRVFRYLLGTRTLSRVYGGEK---RELEGFVDAD-GATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVATTHAAKEAVWLRR 204          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.750e-38
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIILS-VAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPG-RGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            I R+R+  TL   Q +Y +T+ ERF +  ++ + +     K LSK +   T  ++  M   PYR +VG  ++ A  TRPD++F   QL++F DNPGP HWRAA++AL+YL  TR  G+  GG        LSA+VDADY  CPDTRR VSG  ++  G  ISW ++ Q +   + +E+E+VAL+  + E  +++Q+
Sbjct:  569 IERNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKTLSKSQCATTPEDISFMASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLTKKQNIVTLSTTEAEFVALSLCIQECLYIQQL 764          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A4S4KX50_9AGAM (Integrase catalytic domain-containing protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KX50_9AGAM)

HSP 1 Score: 150 bits (379), Expect = 1.940e-38
Identity = 77/195 (39.49%), Postives = 119/195 (61.03%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTK-TSIILSVAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            + RDR+   L+  Q QYI  + ERF ++  T++   +  G  LSK  +P+   E+  M+ +PYR++VG L++ A  TRPDIS+A   LA+F+ NPGP HW+AA+   +YL  T+D+ +TY  +P      + + DAD+G   D RRS SG  V M  GAISW SR+Q +   + +E+EY++  +   E+ +LR +
Sbjct:  878 VERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPYAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWLRNL 1072          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.060e-38
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIILS-VAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPG-RGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            I R+R+  TL   Q +Y +T+ ERF +  ++ + +     K LSK +   T  ++  M   PYR +VG L++ A  TRPD++F   QL++F DNP P HWRAA++AL+YL  TR  G+  GG        LSA+VDADY  CPDTRR VSG  ++  G  ISW ++ Q +   + +E+E+VAL+  + E  +++Q+
Sbjct: 1713 IERNRSERTLFLHQTRYCETVVERFDMASSNPVHTPFESSKTLSKSQCATTPEDISFMASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGSDSVHNPFLSAYVDADYANCPDTRRCVSGYVLLFLGSPISWLAKKQNIVTLSTTEAEFVALSLCIQECLYIQQL 1908          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 137 bits (346), Expect = 1.370e-37
Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   47 SPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEP-GRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLR 192
            SPQTD EVEEM+QIPY+E VG L++ +T TRPDIS+A  Q+AKFN NPG  HW+A ++  +YL  TR+ GI +   P G+  ++  + DAD+   PD + S SG   +  GG+ SWFSR Q  T+ + +E+E+VA  E   E  ++R
Sbjct:    2 SPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGIFFSPNPSGKEEEIVGFTDADHAGDPDDQTSTSGCVFICHGGSFSWFSRKQGCTSLSTTEAEFVAGGEAAKEATWIR 148          
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY)

HSP 1 Score: 147 bits (371), Expect = 2.380e-37
Identity = 80/195 (41.03%), Postives = 119/195 (61.03%), Query Frame = 0
Query:    1 ITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIILS-VAGGKALSKPESPQTDAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWRAAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGGAVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQI 194
            + RDR A TL   Q  YI ++ +RFG      + + +     LS  +SPQT AE   MR IPYRE VG L++A+  TRPDI++A   L++F+DNPG  HW A ++  +YL  T+DL +TYG +   G  L  + DAD G+  + R+++SG A ++ GGA+SW S+ Q++ A + +E+EYVA      E  +LR +
Sbjct: 1274 VERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSPQTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYGAQ---GLDLVGYTDAD-GSMHEDRKAISGYAFLIDGGAVSWSSKRQEIIALSTTEAEYVAATHAAKEALWLRSL 1464          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig179004.4733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4L7S0_9AGAM3.600e-4139.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A146HBL6_MYCCL3.440e-4039.60Uncharacterized protein n=1 Tax=Mycena chlorophos ... [more]
A0A4S4KQD1_9AGAM1.340e-3939.49DOMON domain-containing protein n=1 Tax=Phellinidi... [more]
A0A4S4KQ60_9AGAM6.540e-3939.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S8R4_PYCCI1.300e-3841.24Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A6G0W6P6_9STRA1.750e-3840.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4KX50_9AGAM1.940e-3839.49Integrase catalytic domain-containing protein n=2 ... [more]
A0A6G0W780_9STRA2.060e-3840.31Integrase catalytic domain-containing protein n=3 ... [more]
UPI001E1BB9B01.370e-3746.94secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A401H4R8_9APHY2.380e-3741.03Uncharacterized protein n=2 Tax=Sparassis crispa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 52..194
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 52..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig179004contigH-elongata_contig179004:30..632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig179004.4733.1mRNA_H-elongata_contig179004.4733.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig179004 30..632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig179004.4733.1 ID=prot_H-elongata_contig179004.4733.1|Name=mRNA_H-elongata_contig179004.4733.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
ITRDRNAGTLTFDQHQYIQTMAERFGVTKTSIILSVAGGKALSKPESPQT
DAEVEEMRQIPYREIVGVLIWAATMTRPDISFAAHQLAKFNDNPGPTHWR
AAQKALQYLWRTRDLGITYGGEPGRGTKLSAWVDADYGTCPDTRRSVSGG
AVMMAGGAISWFSRVQKVTAAALSESEYVALAEMVNELHFLRQIKEFITP
P
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like