prot_H-elongata_contig17882.4726.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17882.4726.1
Unique Nameprot_H-elongata_contig17882.4726.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length545
Homology
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: D8LLK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK2_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 7.140e-66
Identity = 175/378 (46.30%), Postives = 204/378 (53.97%), Query Frame = 0
Query:   37 VGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMVIGVVPRYDPHGMGLPMVPPRPPLEQGRPRAATVDG-EPSHSRGSIPAAQVAARRLIPRRNSSPDPSSPS--LGXXXXXXXXXGNNRPLVRDAVVHPTSPVMDTSAPRGNELRQSSGAVSTFERNPPPPLPGIELLAREWESGETASGGGXXXXXXXXXHSDSFGDYNRGNISAPLLGAFPFSIWNLIQFSSSPTTSGGHISAGGGLRPTIDTSWQHREVGIGPTAPPSGGGFGVTGSETGVRTEGRECTA-----GLVALTESGRGIE 406
            VGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRT++ IRFFPQVFF+YFTLFH+YFFSFPFGFSYLALVTTVLFLQHSMLF WN YEVPALRAG VS++ PRQAGMVIGVVP     G  +P          GR RAAT    E       +PAA + A R+I RRNSSPDP+SPS  LG                                PR  ++R +S          P P          W      SGGG         H+       R ++SAPLLG+FPFS W ++Q S    T  G  + G     T    +          A P     G +G+ET   ++  E T      G+    E+ RG+E
Sbjct:  520 VGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTAVCIRFFPQVFFLYFTLFHIYFFSFPFGFSYLALVTTVLFLQHSMLFCWNRYEVPALRAGVVSASRPRQAGMVIGVVPSGG--GGDVPAT--------GRQRAATASSLEQPREESILPAAALDAGRVISRRNSSPDPTSPSPPLGSNSSGSARGDGVAAATXXXXXXXXXXXXXXXXPRA-DVRATSPVARRAAAGWPVPS--------GWVGDR--SGGGDGRSDVLARHT------RRHSVSAPLLGSFPFSFWRVLQTS----TVDGQAAVGAAAATTTGIGYARTAA-----ADPVQRRHGGSGTETSGDSDSAEATGSGGEDGVDIRRETDRGVE 861          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A6H5K094_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K094_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 9.600e-64
Identity = 125/146 (85.62%), Postives = 131/146 (89.73%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMV 146
            MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRT++ IRFFPQVFF+YFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLF WN YE     +G  +    +QAG V
Sbjct:  530 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTAVCIRFFPQVFFLYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFCWNRYEA----SGGTAVVQRQQAGTV 671          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A835Z245_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z245_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.780e-58
Identity = 109/124 (87.90%), Postives = 118/124 (95.16%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNT 124
            ML+FTFLLQHH+R+R PYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVW+CEVYSV+SVRTS SIRFFP+V   YF LFHVYFFSFPFGFSYLALV+TVLFLQHSML+FWN+
Sbjct:  216 MLRFTFLLQHHIRNRQPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWMCEVYSVISVRTSTSIRFFPRVVSFYFALFHVYFFSFPFGFSYLALVSTVLFLQHSMLYFWNS 339          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A7S2F3B4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3B4_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.780e-55
Identity = 99/136 (72.79%), Postives = 117/136 (86.03%), Query Frame = 0
Query:   12 VRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMVI 147
            VRHRL Y  LI TH+VESLV+VPIMVGILFFLFEFFSDQLLAFMVLS+VW+CEVYSV+SVRT +SIRFFP++FF+Y TLFHVYFFSFP GFS+LAL+TT   L H+ML+FWN +EVPALR G ++   PRQA + +
Sbjct:    1 VRHRLSYVALIVTHLVESLVYVPIMVGILFFLFEFFSDQLLAFMVLSLVWICEVYSVISVRTMLSIRFFPRIFFLYLTLFHVYFFSFPMGFSHLALLTTFCLLLHAMLYFWNRFEVPALRCGDITMLRPRQADIPV 136          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A7S1U341_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U341_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.990e-54
Identity = 107/161 (66.46%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMVIGVVPRYDPHGMGLP 161
            ML+FT+ LQHHVR+ LPY PL+FTHVVESLVFVPIMVGILFFLFEFFSDQLLAF+VLSVVWLCEVYSVV+VRTS+S RFFP++FF+Y +LFH+YFFSFP+GFSYLAL   V FL H++   WN +EVPAL  G ++   PR        +P Y  H    P
Sbjct:  306 MLRFTYHLQHHVRNDLPYGPLVFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFLVLSVVWLCEVYSVVAVRTSLSTRFFPRIFFLYLSLFHIYFFSFPYGFSYLALAACVAFLFHAVTVSWNRWEVPALLNGQITIDRPRSE------IPWYGQHAPARP 460          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A1W0A6K2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6K2_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.640e-53
Identity = 98/150 (65.33%), Postives = 125/150 (83.33%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMVIGVV 150
            MLKFT LLQHH+R+RLPY  L+F+H++ESLVFVPIMVG+LFFLFEFF DQLLAF+V+S+VWLCE+YSVV VRT +S+ FFP +F MYF++FHVYFF FPFGFSY AL TT++FL H+ML F N +E+PAL  G +++  PRQ  +  G++
Sbjct:  237 MLKFTILLQHHIRYRLPYMKLVFSHIIESLVFVPIMVGMLFFLFEFFKDQLLAFIVMSLVWLCELYSVVCVRTWLSLTFFPPLFLMYFSMFHVYFFCFPFGFSYTALWTTIIFLLHTMLLFLNRFEIPALNEGLITAQTPRQFVLSPGII 386          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A7S2SU34_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU34_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.810e-53
Identity = 98/141 (69.50%), Postives = 120/141 (85.11%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPR 141
            MLKFT +LQHHVRHR+ Y  LI +H+V+SLV+VP+MVGILFFLFEFFSDQLLAFMVLSVVW+CEVYSV+SVRT+ SI+ FP++F +YFTLFHVYFFS+PF FS+LAL++TV  L H MLFFW+ +EVP  + G +S   PR
Sbjct:  140 MLKFTLILQHHVRHRMSYVALIISHLVDSLVYVPLMVGILFFLFEFFSDQLLAFMVLSVVWICEVYSVISVRTTESIQLFPRLFLLYFTLFHVYFFSYPFAFSHLALLSTVTLLCHGMLFFWDRFEVPGYQDGTISQNRPR 280          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A024U8M7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8M7_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.950e-52
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQ 142
            ML+FT  LQHH+RHR+PY  L+F+H++ESLVFVPIMVG+LFFLFEFF D+LLAFM++SVVWLCE+YSV+ VRT +S+ FFP VF   F LFHVYFFSFPFGFSY+AL TT  FL   MLFF N +E+PALR G VS+  PRQ
Sbjct:  242 MLRFTLSLQHHIRHRMPYLKLVFSHIIESLVFVPIMVGMLFFLFEFFKDRLLAFMIMSVVWLCELYSVICVRTCLSLTFFPPVFLSLFALFHVYFFSFPFGFSYVALWTTTAFLAQQMLFFLNRFELPALRDGVVSAQWPRQ 383          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: W4GVL1_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVL1_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.450e-52
Identity = 99/142 (69.72%), Postives = 117/142 (82.39%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQ 142
            ML+FT  LQHH+RHR+PY  L+F+H++ESLVFVPIMVG+LFFLFEFF D+LLAFMV+SVVWLCE+YSV+ VRT +S+ FFP VF   F LFHVYFF FPFGFSY+AL TTV FL H ML F N +E+PALR G VS+  PRQ
Sbjct:  254 MLRFTLSLQHHIRHRMPYIKLVFSHIIESLVFVPIMVGMLFFLFEFFKDRLLAFMVMSVVWLCELYSVICVRTWLSLTFFPPVFLSLFALFHVYFFCFPFGFSYVALWTTVAFLSHQMLLFLNRFELPALRDGVVSAQWPRQ 395          
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Match: A0A1V9YDG0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDG0_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.710e-51
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 0
Query:    1 MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQLLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPFGFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQ 142
            MLKFT LLQHH+RHRLPY  L+ +H++ESLVFVPIMVG+LFFLFEFF DQLLAF+V+S+ WLCE+YSVV VRT +S+ FFP +F +YF++FHVYFF FPFGFSY AL TT++ L H+ML F N +E+PAL  G VS+  PRQ
Sbjct:  237 MLKFTILLQHHIRHRLPYMKLVLSHIIESLVFVPIMVGMLFFLFEFFKDQLLAFIVMSLAWLCELYSVVCVRTWLSLTFFPPLFLLYFSMFHVYFFCFPFGFSYTALWTTIVLLVHTMLLFLNRFEIPALHDGLVSAQTPRQ 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17882.4726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLK2_ECTSI7.140e-6646.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K094_9PHAE9.600e-6485.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z245_9STRA1.780e-5887.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2F3B4_9STRA3.780e-5572.79Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1U341_9STRA1.990e-5466.46Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A1W0A6K2_9STRA1.640e-5365.33Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2SU34_9STRA2.810e-5369.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024U8M7_9STRA3.950e-5269.01Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
W4GVL1_9STRA5.450e-5269.72Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A1V9YDG0_9STRA1.710e-5167.61Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019144MembralinPANTHERPTHR21650:SF4MEMBRALINcoord: 6..149
NoneNo IPR availablePANTHERPTHR21650MEMBRALIN/KINETOCHORE PROTEIN NUF2coord: 6..149
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..544
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..49
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17882contigH-elongata_contig17882:2865..6802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17882.4726.1mRNA_H-elongata_contig17882.4726.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17882 1423..6810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17882.4726.1 ID=prot_H-elongata_contig17882.4726.1|Name=mRNA_H-elongata_contig17882.4726.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=545bp
MLKFTFLLQHHVRHRLPYAPLIFTHVVESLVFVPIMVGILFFLFEFFSDQ
LLAFMVLSVVWLCEVYSVVSVRTSMSIRFFPQVFFMYFTLFHVYFFSFPF
GFSYLALVTTVLFLQHSMLFFWNTYEVPALRAGAVSSTHPRQAGMVIGVV
PRYDPHGMGLPMVPPRPPLEQGRPRAATVDGEPSHSRGSIPAAQVAARRL
IPRRNSSPDPSSPSLGGGSGGGGGDGNNRPLVRDAVVHPTSPVMDTSAPR
GNELRQSSGAVSTFERNPPPPLPGIELLAREWESGETASGGGEGGGRDGG
GHSDSFGDYNRGNISAPLLGAFPFSIWNLIQFSSSPTTSGGHISAGGGLR
PTIDTSWQHREVGIGPTAPPSGGGFGVTGSETGVRTEGRECTAGLVALTE
SGRGIERMCPTSPTAESALGVHPEVDAPPAAVARSVATIHSRSCKVGISG
VEREQERTARWRPDSVVVGEREGGSGGGGDGDSGNNAAERLGSGGAASAD
EAPPPQSLVGDEVGREEPSQETEILRRERLSLGGTQYRGMYDDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019144Membralin