prot_H-elongata_contig17856.4711.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17856.4711.1
Unique Nameprot_H-elongata_contig17856.4711.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length537
Homology
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.690e-78
Identity = 194/400 (48.50%), Postives = 235/400 (58.75%), Query Frame = 0
Query:  148 QEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQNTQASSAPILSAVRRAVPARAALA--ATAMAVARSTLGEETTAGHLCPPPE-----VKIFVTRVAFDRSKVQVCGCALDEYHGKIITRFWLVNTWRVVSLSTTPARFGSLSHAHQAEQQALRERVDLPIRQAVDSTETAPEGRGRNGRGGKCSR-GRAP---VPSGTAINWIDALGTGRGAGRGGGDDASVQAEVALSATGRMQGAVSKGVLTPRMRSRLCRALLLEAAERVARLIPAGVAPLGDRDLAAFDVGRGGTSVSKDEVEGGGKAGEAEDMEEMSPPPARSYWRLKRSCESYRIRRSEMLLTATFGSWLVGSRRQQEFAVDER-GYVPLA 535
            +EQ +GALRIKSSRSNISEEGRTMSMSCSDKLAKWA LG+QGGLL+SWVEP+FLSSIV+SA  +      AP+ SA+ RA+P RAALA   ++      T+G E    H   P E     + +FV+ V F RSK Q      D+  G   +   + +   +     T +   +      A   A   R  +P        ET+   R  N   GK SR  R P   VPSGT++NWI+ LGTGRG G GGGD A +QAEV LSATGRMQGAVSKGVLT R RSRLCRA LLEAA  VAR      AP+ D   +  +    GT    + V+    AGE     E      RSYWRLK++  +YR+RR  ML T TF +WLVG + +Q FAVDER G V LA
Sbjct:  319 EEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWVEPIFLSSIVISADPRTD--GPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMAVFVSEVTFARSKAQSEQRVFDD-EGSCSSTSGVGSPGSITPAKATVSSVKASPSIADASIAAGSARQRMPGDNDRSGRETSQGTRSDNSIIGKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDTARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAANLVARAYLPQRAPMCDHHYSDIE----GTGEETETVQ----AGEGASGSEGPESGGRSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVLLA 707          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.550e-14
Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 0
Query:  138 GELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQNTQASSAPILSAVRRAVPARAA 233
            G   L ++RE  QA+G LR+KS RS++  E RT SMSCSDKLA+WAVLGLQG LL  W+EPV LSS+ VSA   + +A+     +A+RRA+  RAA
Sbjct:  274 GAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQGRLLRRWLEPVLLSSVTVSA---DARAAPDAQRAAMRRAICDRAA 366          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A2P4XLQ8_9STRA (tRNA-specific adenosine deaminase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLQ8_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.600e-12
Identity = 50/118 (42.37%), Postives = 67/118 (56.78%), Query Frame = 0
Query:   94 SGTSDGRPRPDKMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQ 211
            SG +D +    ++  TGAK     ++  A  ++ + AD+                 QA+G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FLSSIVVS   Q
Sbjct:  174 SGQADDQSERSELRLTGAKAHKRSRDVDAQCDQDSPADKKFA--------------QAVGIARMKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIVVSGDDQ 277          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: K0R2A8_THAOC (A to I editase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2A8_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 2.150e-12
Identity = 46/104 (44.23%), Postives = 70/104 (67.31%), Query Frame = 0
Query:  105 KMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSW-VEPVFLSSIVVS 207
            ++ FTGAKI+ +  E        ++ + P+G   E+ +R+ REQ Q +  LR+KSSRSNI  + R+MS+ C+DK+ +W+V GLQG LLS + +EP+ L+SI VS
Sbjct:  193 EVNFTGAKIILSGGEEHQTTNITSLQEEPEG---EVKVRLGREQVQIVKKLRVKSSRSNIPNKMRSMSLCCADKIVRWSVFGLQGALLSKFLIEPITLTSICVS 293          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A7S0N650_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N650_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 3.960e-12
Identity = 49/98 (50.00%), Postives = 67/98 (68.37%), Query Frame = 0
Query:  151 ALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVSASSQNTQASSAPILSAVRRAVPARAALAATAMAVARSTLGE 248
            ++G +R K  RS++    RT+S+SCSDK+ +WAVLGLQGG LS WV PV L S+VVSA   +  ASS  + +A+RR++  R+ LAA A A  R+  GE
Sbjct:    1 SIGGVRTKPGRSDVPPARRTLSVSCSDKICRWAVLGLQGGALSRWVAPVPLHSVVVSA---DPAASSQALAAALRRSLAQRS-LAAAAGARVRAWWGE 94          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A833X2Q8_PHYIN (Adenosine-deaminase (Editase) domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X2Q8_PHYIN)

HSP 1 Score: 78.6 bits (192), Expect = 6.960e-12
Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 0
Query:  142 LRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 207
            L+ D++  QA+G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FLSSI+VS
Sbjct:  194 LQPDKKFAQAVGIARVKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIIVS 259          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A662WKZ4_9STRA (A to I editase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKZ4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 7.940e-12
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 0
Query:  106 MTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVV 206
            +  TGAK  A  + RG+              AGE     ++  EQ +G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FL SIVV
Sbjct:  458 LRLTGAKAHAGKRSRGSES------------AGEQEEPPEKRFEQTMGLARVKSGRSDLPVEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLRSIVV 546          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A329S331_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S331_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.100e-11
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  144 IDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 207
            +D++  QA+G  R+KS RS++  E +T+SMSCSDKLA+W  LGLQG LL  W EP+FLSSI+VS
Sbjct:  202 LDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVS 265          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: A0A8J5MBZ2_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MBZ2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.740e-11
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  144 IDREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 207
            +D++  QA+G  R+KS RS++  E +T+SMSCSDKLA+W  LGLQG LL  W EP+FLSSI+VS
Sbjct:  442 LDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVS 505          
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Match: W2R497_PHYPN (A to I editase domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2R497_PHYPN)

HSP 1 Score: 77.4 bits (189), Expect = 1.920e-11
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0
Query:  145 DREQEQALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVFLSSIVVS 207
            D++  QA+G  R+KS RS++  E +T+SMSCSDKLAKW  LGLQG LL  W EP+FLSSI VS
Sbjct:  202 DKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSITVS 264          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17856.4711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI40_ECTSI1.690e-7848.50A to I editase domain-containing protein n=2 Tax=E... [more]
A0A835ZEK1_9STRA2.550e-1455.21A to I editase domain-containing protein n=1 Tax=T... [more]
A0A2P4XLQ8_9STRA1.600e-1242.37tRNA-specific adenosine deaminase n=2 Tax=Phytopht... [more]
K0R2A8_THAOC2.150e-1244.23A to I editase domain-containing protein n=1 Tax=T... [more]
A0A7S0N650_9CHLO3.960e-1250.00Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A833X2Q8_PHYIN6.960e-1260.61Adenosine-deaminase (Editase) domain n=1 Tax=Phyto... [more]
A0A662WKZ4_9STRA7.940e-1246.53A to I editase domain-containing protein n=1 Tax=N... [more]
A0A329S331_9STRA1.100e-1159.38A to I editase domain-containing protein n=1 Tax=P... [more]
A0A8J5MBZ2_9STRA1.740e-1159.38A to I editase domain-containing protein n=1 Tax=P... [more]
W2R497_PHYPN1.920e-1161.90A to I editase domain-containing protein n=9 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002466Adenosine deaminase/editasePFAMPF02137A_deamincoord: 143..233
e-value: 1.8E-19
score: 70.4
IPR002466Adenosine deaminase/editasePROSITEPS50141A_DEAMIN_EDITASEcoord: 169..524
score: 16.163
NoneNo IPR availablePANTHERPTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINcoord: 164..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17856contigH-elongata_contig17856:2171..5358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17856.4711.1mRNA_H-elongata_contig17856.4711.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17856 2171..6877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17856.4711.1 ID=prot_H-elongata_contig17856.4711.1|Name=mRNA_H-elongata_contig17856.4711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=537bp
MSNNGRGRRRMNMISFHACGGGGDNGGDSKTETAASPRGEERGSGGRTKK
RYRCNGLNCSVAYSPCSSPFFRCSCTDLRPVEHAHGGGEERCLSGTSDGR
PRPDKMTFTGAKIVAAVKERGAAGEKFAVADRPDGLAGELVLRIDREQEQ
ALGALRIKSSRSNISEEGRTMSMSCSDKLAKWAVLGLQGGLLSSWVEPVF
LSSIVVSASSQNTQASSAPILSAVRRAVPARAALAATAMAVARSTLGEET
TAGHLCPPPEVKIFVTRVAFDRSKVQVCGCALDEYHGKIITRFWLVNTWR
VVSLSTTPARFGSLSHAHQAEQQALRERVDLPIRQAVDSTETAPEGRGRN
GRGGKCSRGRAPVPSGTAINWIDALGTGRGAGRGGGDDASVQAEVALSAT
GRMQGAVSKGVLTPRMRSRLCRALLLEAAERVARLIPAGVAPLGDRDLAA
FDVGRGGTSVSKDEVEGGGKAGEAEDMEEMSPPPARSYWRLKRSCESYRI
RRSEMLLTATFGSWLVGSRRQQEFAVDERGYVPLAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002466A_deamin