prot_H-elongata_contig17850.4708.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17850.4708.1
Unique Nameprot_H-elongata_contig17850.4708.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: D8LMS2_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS2_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 7.230e-82
Identity = 123/145 (84.83%), Postives = 136/145 (93.79%), Query Frame = 0
Query:    1 MTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            +TVMQDLS EV +K+ AE +RPI+PAALAGLLSTLLY++RGSP+FVEPIVAGLD RGRP+LCGQDILGA VEVDDFVVAGTSAQSLYGTCEAFFR  M+REELFR A+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:   76 LTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 220          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A6H5JNZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ3_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 5.080e-63
Identity = 101/142 (71.13%), Postives = 114/142 (80.28%), Query Frame = 0
Query:    4 MQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            MQDLS EV +K+ AE +RPI+PAALAGLLSTLLY++RGSP+FVEPIVAGLD RG+P+LCGQ                    SLYGTCEAFFR  M+REELFR A+RCLLSALERDCLSGYGAVVHLIT++GIETRELTTRMD
Sbjct:    1 MQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGKPYLCGQ--------------------SLYGTCEAFFRPGMEREELFRVASRCLLSALERDCLSGYGAVVHLITEEGIETRELTTRMD 122          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: R7QTK3_CHOCR (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTK3_CHOCR)

HSP 1 Score: 155 bits (392), Expect = 3.470e-45
Identity = 69/126 (54.76%), Postives = 93/126 (73.81%), Query Frame = 0
Query:   20 NRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            NR I P   + L+S+ LY +R  P+F EP++AGLD   +PFLC  D+LG   E DDF VAGT A+SL GTCE F+R +++ E+LF   ++ LL+AL+RDC+SG+GAVVH+IT+DG+ TREL  RMD
Sbjct:   79 NRKIKPKTFSNLVSSTLYGKRFGPYFSEPVIAGLDKDNKPFLCSMDLLGCIAEADDFAVAGTCAESLLGTCETFYRPNLEPEDLFETVSQSLLAALDRDCISGWGAVVHIITKDGVTTRELDGRMD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A2V3J6M2_9FLOR (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M2_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 4.920e-45
Identity = 70/144 (48.61%), Postives = 106/144 (73.61%), Query Frame = 0
Query:    2 TVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            T+ Q   F++ + A  EN R + P   A L+S+ LY++R +P+F EP++AGLD   +P++C  D+LG   E  +FVVAGT A+SL+GTCE F++ D++ +ELF   ++ LL+AL+RDC+SG+GAVVH+IT+DG++T+EL  RMD
Sbjct:   62 TLDQLFRFKLELYAMREN-RLMKPKTFASLVSSTLYSKRFAPYFSEPVIAGLDKDNKPYICSMDLLGCVAEETEFVVAGTCAESLFGTCETFYKKDLEPDELFETVSQALLAALDRDCISGWGAVVHIITKDGVQTKELDGRMD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A3P3Y3V5_PLABS (Proteasome subunit beta n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y3V5_PLABS)

HSP 1 Score: 154 bits (388), Expect = 1.400e-44
Identity = 69/144 (47.92%), Postives = 104/144 (72.22%), Query Frame = 0
Query:    2 TVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            TV   L F++ +    E  R I P   A L+ST+LY++R  P+FVEP+VAG+D +G+PF+C  D++GA V  +DFVV+GT+++ LYGTCE+ +  ++  EELF   ++ LL+A++RDCLSG+GA VH+IT+DG+ +R+L  R D
Sbjct:   62 TVRNTLQFQLKLYKLREE-REIEPHVFANLVSTMLYSKRFGPYFVEPVVAGIDKKGKPFICAMDLIGAPVFAEDFVVSGTASEELYGTCESLYTPNLGPEELFETVSQALLAAVDRDCLSGWGATVHIITKDGVTSRKLKCRQD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A0H5R549_9EUKA (Proteasome subunit beta n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R549_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 1.980e-44
Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    2 TVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            TV   L F + +    E  R I P   + +LST+LY +R  P+FVEP+VAG+D  G+PF+C  D+LGA V  DDFVV+GT+ + LYGTCE+ +  ++  +ELF   ++ LL+A +RDCLSG+GAVVH++T+D I TR L TR D
Sbjct:   62 TVRNRLEFRLKMYKLREE-REIEPKVFSNMLSTMLYEKRFGPYFVEPVVAGIDKAGKPFICAMDLLGAAVYADDFVVSGTTGEELYGTCESLYSPNLSPDELFETVSQALLAACDRDCLSGWGAVVHILTKDNITTRVLKTRQD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A1X6NP67_PORUM (Proteasome subunit beta n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP67_PORUM)

HSP 1 Score: 151 bits (382), Expect = 1.130e-43
Identity = 71/146 (48.63%), Postives = 102/146 (69.86%), Query Frame = 0
Query:    1 MTVMQDL-SFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            +T + +L +F++ + A  E  R I P   A L+S+ LY +R  P+F EP++AGL + G PFLC  D+LGA    DDFVV+GT A+SL+GTCE FFR DM+ +ELF    + L++AL+RDC+SG+G  VH+IT++G+ T+ L  RMD
Sbjct:   60 VTTLHNLFNFKLNLYAMREG-RTIKPTTFASLVSSTLYEKRFGPYFAEPVIAGLQADGTPFLCAMDLLGAMAVADDFVVSGTCAESLFGTCETFFRKDMNPDELFETLGQSLMAALDRDCISGWGVDVHIITKEGVTTKSLKARMD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: B7G8Z3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G8Z3_PHATC)

HSP 1 Score: 150 bits (378), Expect = 4.560e-43
Identity = 73/144 (50.69%), Postives = 101/144 (70.14%), Query Frame = 0
Query:    2 TVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            T+   L F   +    E  R +SPA L+ LLSTLLY +R  P+FVEPIVAGL+ + +PFL   D++GA V+ DDFVV+GT   +LYG CE+ +R D++ EELF   A+ LLS+++RD +SG+G VVH+IT+DG+ T+EL  R D
Sbjct:   62 TLKNILEFRKNLYELKEE-REMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFLSAMDLIGAPVQADDFVVSGTCTGNLYGMCESLYRPDLEPEELFETIAQALLSSVDRDAISGWGGVVHIITKDGVTTKELKGRQD 204          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: M2W804_GALSU (Proteasome subunit beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W804_GALSU)

HSP 1 Score: 148 bits (374), Expect = 1.950e-42
Identity = 67/125 (53.60%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   21 RPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            R I PA+ A ++++ LY++R SP+FVEP+VAGL  +G P+LC QD+LGA +  +DFVV+GT A+SLYGT E F++ ++   ELF   ++ LL+A++RDCLSG+GA+VH+IT +GIET+ L  RMD
Sbjct:   82 REIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLLGAPLFAEDFVVSGTCAESLYGTSETFWKPNLSPAELFEVTSQSLLAAVDRDCLSGWGAIVHMITLNGIETKVLKARMD 206          
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.600e-42
Identity = 71/144 (49.31%), Postives = 101/144 (70.14%), Query Frame = 0
Query:    2 TVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIVAGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDREELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD 145
            T+ Q L F   +    E  R ++P   + LLSTLLY +R  P+FVEPIVAGLD++G+PFL G D++GA V  DDFVV+GT   ++YG CE  ++ DM+ ++LF   A+ LL++++RD LSG+G VVH+IT+DG+ +REL  R D
Sbjct:   62 TLDQLLKFRQNLYELREE-REMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDMEPDQLFETLAQALLASVDRDALSGWGGVVHIITKDGVTSRELKGRQD 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17850.4708.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS2_ECTSI7.230e-8284.83Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNZ3_9PHAE5.080e-6371.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7QTK3_CHOCR3.470e-4554.76Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
A0A2V3J6M2_9FLOR4.920e-4548.61Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
A0A3P3Y3V5_PLABS1.400e-4447.92Proteasome subunit beta n=2 Tax=Plasmodiophora bra... [more]
A0A0H5R549_9EUKA1.980e-4449.31Proteasome subunit beta n=1 Tax=Spongospora subter... [more]
A0A1X6NP67_PORUM1.130e-4348.63Proteasome subunit beta n=1 Tax=Porphyra umbilical... [more]
B7G8Z3_PHATC4.560e-4350.69Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
M2W804_GALSU1.950e-4253.60Proteasome subunit beta n=1 Tax=Galdieria sulphura... [more]
A0A7S2XNS4_9STRA2.600e-4249.31Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 2..145
e-value: 2.0E-32
score: 114.4
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 7..144
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 18..128
e-value: 2.6E-21
score: 76.0
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 2..145
IPR033811Proteasome beta 3 subunitPANTHERPTHR11599:SF62PROTEASOME SUBUNIT BETA TYPE-3coord: 2..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17850contigH-elongata_contig17850:3822..4783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17850.4708.1mRNA_H-elongata_contig17850.4708.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17850 2798..5113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17850.4708.1 ID=prot_H-elongata_contig17850.4708.1|Name=mRNA_H-elongata_contig17850.4708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MTVMQDLSFEVTIKAFAENNRPISPAALAGLLSTLLYAQRGSPFFVEPIV
AGLDSRGRPFLCGQDILGACVEVDDFVVAGTSAQSLYGTCEAFFRVDMDR
EELFRAAARCLLSALERDCLSGYGAVVHLITQDGIETRELTTRMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR033811Proteasome_beta_3